RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 RAD9BQ6WBX8 426 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 ZNF662Q6ZS27 426 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 NPAS4Q8IUM7 802 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 GPD1LQ8N335 351 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 TMEM143Q96AN5 459 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 SPAG5Q96R06 1193 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 EIF3CQ99613 913 aaKnown RBP13.21□□□□□ -0.29
SNU13-201ENST00000215956 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 MYO1AQ9UBC5 1043 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.29
SNU13-201ENST00000215956 PCDHGC5Q9Y5F6 944 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 MYO10Q9HD67 2058 aa13.21□□□□□ -0.29
SNU13-201ENST00000215956 IGKV6-21A0A0C4DH24 114 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 USP27XA6NNY8 438 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 KIF5CO60282 957 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 SERPING1P05155 500 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 MARK3P27448 753 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 TMOD1P28289 359 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 AVPR2P30518 371 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 CD52P31358 61 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 POLR2FP61218 127 aaKnown RBP13.21□□□□□ -0.3
SNU13-201ENST00000215956 ETF1P62495 437 aaKnown RBP13.21□□□□□ -0.3
SNU13-201ENST00000215956 FOXK2Q01167 660 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 POU5F1BQ06416 359 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.3
SNU13-201ENST00000215956 GRIK4Q16099 956 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 KLHDC7AQ5VTJ3 777 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 TOGARAM2Q6ZUX3 1019 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 REXO1L1PQ8IX06 675 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 CRIPAKQ8N1N5 446 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 DNAJB3Q8WWF6 145 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 BAP1Q92560 729 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 FAM81BQ96LP2 452 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 CBWD1Q9BRT8 395 aa13.21□□□□□ -0.3
SNU13-201ENST00000215956 AGO3Q9H9G7 860 aaKnown RBP13.21□□□□□ -0.3
SNU13-201ENST00000215956 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.3
SNU13-201ENST00000215956 MBLAC1A4D2B0 266 aaPredicted RBP13.2□□□□□ -0.3
SNU13-201ENST00000215956 LRRC53A6NM62 1247 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 ATF7P17544 494 aaPredicted RBP13.2□□□□□ -0.3
SNU13-201ENST00000215956 PON1P27169 355 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 MRPS6P82932 125 aaKnown RBP13.2□□□□□ -0.3
SNU13-201ENST00000215956 ASIC2Q16515 512 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 SNRNP35Q16560 246 aaKnown RBP13.2□□□□□ -0.3
SNU13-201ENST00000215956 ZPBP2Q6X784 338 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 SUSD6Q92537 303 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 FTHL17Q9BXU8 183 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 GANQ9H2C0 597 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 PCIF1Q9H4Z3 704 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 HAUS4Q9H6D7 363 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 TLE6Q9H808 572 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 AIPL1Q9NZN9 384 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 STYXL1Q9Y6J8 313 aa13.2□□□□□ -0.3
SNU13-201ENST00000215956 RRN3P2A6NIE6 340 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 ZNF233A6NK53 670 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 RNF225M0QZC1 329 aaPredicted RBP13.19□□□□□ -0.3
SNU13-201ENST00000215956 EXTL3O43909 919 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 STAG3L1P0CL83 205 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 UCHL3P15374 230 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 CDC42EP1Q00587 391 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 MAPK6Q16659 721 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 CDCA2Q69YH5 1023 aaPredicted RBP13.19□□□□□ -0.3
SNU13-201ENST00000215956 WDR59Q6PJI9 974 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 RTN4RL1Q86UN2 441 aaPredicted RBP13.19□□□□□ -0.3
SNU13-201ENST00000215956 VPS36Q86VN1 386 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 CRACR2AQ9BSW2 395 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 KIFC3Q9BVG8 833 aa13.19□□□□□ -0.3
SNU13-201ENST00000215956 MRPL4Q9BYD3 311 aaKnown RBP13.19□□□□□ -0.3
SNU13-201ENST00000215956 SUCLA2Q9P2R7 463 aaPredicted RBP13.19□□□□□ -0.3
SNU13-201ENST00000215956 H0Y858 1186 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 PER2O15055 1255 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 KRT86O43790 486 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 AKR1B10O60218 316 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 NOL4O94818 638 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 RPLP2P05387 115 aaKnown RBP13.18□□□□□ -0.3
SNU13-201ENST00000215956 FERP16591 822 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 STAT1P42224 750 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 GATMP50440 423 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 MXI1P50539 228 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 RBM10P98175 930 aaKnown RBP13.18□□□□□ -0.3
SNU13-201ENST00000215956 RAPGEF1Q13905 1077 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 CAPSQ13938 189 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 MTF1Q14872 753 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
SNU13-201ENST00000215956 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 TRIM65Q6PJ69 517 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 KIAA1328Q86T90 577 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 ZNF592Q92610 1267 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 CHP1Q99653 195 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 NFKBIZQ9BYH8 718 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 FAM49AQ9H0Q0 323 aaPredicted RBP13.18□□□□□ -0.3
SNU13-201ENST00000215956 TMEM8AQ9HCN3 771 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 NLRC4Q9NPP4 1024 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 TLR9Q9NR96 1032 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 SQORQ9Y6N5 450 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 WDR87Q6ZQQ6 2873 aa13.18□□□□□ -0.3
SNU13-201ENST00000215956 ANKRD63C9JTQ0 380 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms