RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PPP1R2P3Q6NXS1 205 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 SRLQ86TD4 932 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 SLC7A14Q8TBB6 771 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 TMEM39BQ9GZU3 492 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 PTPRHQ9HD43 1115 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 SEL1LQ9UBV2 794 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 CAV1Q03135 178 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 GCOM2Q9BZD3 368 aaPredicted RBP14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 THAP2Q9H0W7 228 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 PNMA8BQ9ULN7 279 aaPredicted RBP14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 CLCA2Q9UQC9 943 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 AGRPO00253 132 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 KLRC1P26715 233 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 SPATA2LQ8IUW3 424 aaPredicted RBP14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 ELMOD1Q8N336 334 aa14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 ASCC2Q9H1I8 757 aaPredicted RBP14.3□□□□□ -0.12
TGFBR3-201ENST00000212355 AFF2P51816 1311 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 FAM187AA6NFU0 413 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 DPYSL4O14531 572 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 SMNDC1O75940 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 HNRNPCP07910 306 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■□□□ 12
TGFBR3-201ENST00000212355 SOX10P56693 466 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 EZH2Q15910 746 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 CCNI2Q6ZMN8 369 aaPredicted RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 C2orf69Q8N8R5 385 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 ATL2Q8NHH9 583 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 KCNB2Q92953 911 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 MTMR4Q9NYA4 1195 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 STAP1Q9ULZ2 295 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 PPP1R37O75864 691 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 ENDOD1O94919 500 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 MLH1P40692 756 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 PLOD1Q02809 727 aaPredicted RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 GOLGA7BQ2TAP0 167 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 CDC42EP5Q6NZY7 148 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 SENP7Q9BQF6 1050 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 KIAA1586Q9HCI6 787 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 PIH1D1Q9NWS0 290 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 PARNO95453 639 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 NDUFB10O96000 172 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 ACTR2P61160 394 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 DEUP1Q05D60 604 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 CHI3L2Q15782 390 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 CEP55Q53EZ4 464 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 RBM46Q8TBY0 533 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 DDX28Q9NUL7 540 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 BFARQ9NZS9 450 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 EIF3HO15372 352 aaKnown RBP eCLIP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 GGPS1O95749 300 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 ATP6V1B1P15313 513 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 DCAF6Q58WW2 860 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 IGF2BP3O00425 579 aaKnown RBP eCLIP14.29□□□□□ -0.121e-6■■■□□ 18.1
TGFBR3-201ENST00000212355 CAND2O75155 1236 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 SGPL1O95470 568 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 PPARGP37231 505 aaPredicted RBP14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 DNAJC3Q13217 504 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 SLC29A2Q14542 456 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 TJP2Q9UDY2 1190 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 PNMA3Q9UL41 463 aa14.29□□□□□ -0.12
TGFBR3-201ENST00000212355 DYNC1LI2O43237 492 aaPredicted RBP14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 TPST1O60507 370 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 CSDE1O75534 798 aaKnown RBP14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 ANO5Q75V66 913 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 TBC1D16Q8TBP0 767 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 CASKIN2Q8WXE0 1202 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 RALAP11233 206 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 LSP1P33241 339 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 DHX34Q14147 1143 aaKnown RBP14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 GPAT2Q6NUI2 795 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 JAMLQ86YT9 394 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 MICALL2Q8IY33 904 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 LRRN4CLQ8ND94 238 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 CLEC4FQ8N1N0 589 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 TEKT4Q8WW24 435 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 MUC3BQ9H195 1237 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 NEUROG2Q9H2A3 272 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 NPTXRO95502 500 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 PYGBP11216 843 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 SFNP31947 248 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 BARGINQ6ZT62 677 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 SPATA18Q8TC71 538 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 PTPRN2Q92932 1015 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 GPATCH2LQ9NWQ4 482 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 SPATA31A3Q5VYP0 1347 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 LINC00854A0A1B0GVQ3 168 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 ANGPT2O15123 496 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 OCM2P0CE71 109 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 OCMP0CE72 109 aaPredicted RBP14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 YY1P25490 414 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 ABCD1P33897 745 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 LINC00116Q8NCU8 138 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 ARMC2Q8NEN0 867 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 APPL2Q8NEU8 664 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 HASPINQ8TF76 798 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 USP20Q9Y2K6 914 aa14.28□□□□□ -0.12
TGFBR3-201ENST00000212355 PRR23AA6NEV1 266 aa14.27□□□□□ -0.12
TGFBR3-201ENST00000212355 SPDYE5A6NIY4 337 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms