RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 R3HDM1Q15032 1099 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 LAYNQ6UX15 382 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 HORMAD1Q86X24 394 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 JAMLQ86YT9 394 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 COLGALT2Q8IYK4 626 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ARL10Q8N8L6 244 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PIN4Q9Y237 131 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 SAC3D1A6NKF1 404 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PFKFB2O60825 505 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SRGAP2O75044 1071 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 RBMXL2O75526 392 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 TBXAS1P24557 533 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 MAPK1P28482 360 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CDC16Q13042 620 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TMC7Q7Z402 723 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 P4HA3Q7Z4N8 544 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TDRD7Q8NHU6 1098 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 JADE3Q92613 823 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 KIF12Q96FN5 646 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 VPS35Q96QK1 796 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 OSGEPL1Q9H4B0 414 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 LATS2Q9NRM7 1088 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 APOBEC2Q9Y235 224 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 A8MXQ7 604 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TAF5LO75529 589 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 GCLCP48506 637 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 NT5C2P49902 561 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 RAB14P61106 215 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SEPT2Q15019 361 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 KRT31Q15323 416 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PPM1LQ5SGD2 360 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PRR23CQ6ZRP0 262 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 GALNT7Q86SF2 657 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 KLHDC4Q8TBB5 520 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 NSUN6Q8TEA1 469 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 IP6K1Q92551 441 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 METTL22Q9BUU2 404 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 SIK2Q9H0K1 926 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 KIAA1024Q9UPX6 916 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 UHRF1BP1LA0JNW5 1464 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 LCA5LO95447 670 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ANXA5P08758 320 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PRIM2P49643 509 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PURAQ00577 322 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 EXOSC10Q01780 885 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 TRPM8Q7Z2W7 1104 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PLEKHA4Q9H4M7 779 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 DDX41Q9UJV9 622 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 LDOC1O95751 146 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 AFPP02771 609 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 RLBP1P12271 317 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SF3A3Q12874 501 aaKnown RBP eCLIP3.61□□□□□ -1.83
NEB-201ENST00000172853 NME3Q13232 169 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CDH18Q13634 790 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ATAD3BQ5T9A4 648 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 HIPK4Q8NE63 616 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PYROXD1Q8WU10 500 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ZSCAN10Q96SZ4 725 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 STARD7Q9NQZ5 370 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 BAIAP2L1Q9UHR4 511 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SNX9Q9Y5X1 595 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 EHBP1L1Q8N3D4 1523 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CFAP73A6NFT4 308 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 MMEP08473 750 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PLS3P13797 630 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ITGB6P18564 788 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PADI6Q6TGC4 694 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SYT10Q6XYQ8 523 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 DCAF4Q8WV16 495 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 MED15Q96RN5 788 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TINF2Q9BSI4 451 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ZCCHC2Q9C0B9 1178 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 GPAA1O43292 621 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 GH1P01241 217 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 AXLP30530 894 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 GRK4P32298 578 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 HSPA13P48723 471 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PSEN2P49810 448 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 UBE3AQ05086 875 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PPP1R16AQ96I34 528 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ALKBH4Q9NXW9 302 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 RPS6KA6Q9UK32 745 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 MEFVO15553 781 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 CLASP2O75122 1294 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 PPP2R1BP30154 601 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 MDM2Q00987 491 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 ZNF658Q5TYW1 1059 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 FAAH2Q6GMR7 532 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 GRAMD4Q6IC98 578 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SLC30A9Q6PML9 568 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 UBXN6Q9BZV1 441 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PTPN22Q9Y2R2 807 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 IGFALSP35858 605 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ATP2C1P98194 919 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 COG2Q14746 738 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 METTL21CQ5VZV1 264 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 R3HCC1LQ7Z5L2 792 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 AGGF1Q8N302 714 aaeCLIP3.61□□□□□ -1.83
NEB-201ENST00000172853 NEK9Q8TD19 979 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 RBM41Q96IZ5 413 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms