RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 JAG1P78504 1218 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 RIPK1Q13546 671 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 SGSM1Q2NKQ1 1148 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 CCDC125Q86Z20 511 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 MAB21L3Q8N8X9 362 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 STMN2Q93045 179 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 FAM163AQ96GL9 167 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 PRMT6Q96LA8 375 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 NT5C1BQ96P26 610 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 TMEM121Q9BTD3 319 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 PRR12Q9ULL5 1215 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 GYG2O15488 501 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 POLGP54098 1239 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 DRG2P55039 364 aaKnown RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 IRX1P78414 480 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 KPNB1Q14974 876 aaKnown RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 SLC30A9Q6PML9 568 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 PPP1R21Q6ZMI0 780 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 CROCCP2Q86T23 111 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 TTC7BQ86TV6 843 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 RFWD2Q8NHY2 731 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 FAM213AQ9BRX8 229 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 TRAIPQ9BWF2 469 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 ROPN1BQ9BZX4 212 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 ROPN1Q9HAT0 212 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 GINM1Q9NU53 330 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 GRID1Q9ULK0 1009 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 A0A1B0GVG6 124 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 F5H423 210 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-201ENST00000075430 PEX11AO75192 247 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 MFAP3P55082 362 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 KDSRQ06136 332 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 GALNTL6Q49A17 601 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 CTAGE3PQ8IX95 158 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 HSD17B14Q9BPX1 270 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 OLFML3Q9NRN5 406 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 HEY2Q9UBP5 337 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 DNPEPQ9ULA0 475 aa17.75■□□□□ 0.43
CTDP1-201ENST00000075430 hCG_2014768A0A024R1R8 64 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 PRELPP51888 382 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 KIF22Q14807 665 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 ATL2Q8NHH9 583 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 STK32AQ8WU08 396 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 KIAA1586Q9HCI6 787 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 PAPOLBQ9NRJ5 636 aaKnown RBP17.74■□□□□ 0.43
CTDP1-201ENST00000075430 NENFQ9UMX5 172 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 PECAM1P16284 738 aaPredicted RBP17.74■□□□□ 0.43
CTDP1-201ENST00000075430 BLMHQ13867 455 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 SIX1Q15475 284 aaPredicted RBP17.74■□□□□ 0.43
CTDP1-201ENST00000075430 OSBPL8Q9BZF1 889 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 WDR11Q9BZH6 1224 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 DCLK3Q9C098 648 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.74■□□□□ 0.43
CTDP1-201ENST00000075430 C2CD2Q9Y426 696 aa17.74■□□□□ 0.43
CTDP1-201ENST00000075430 COL16A1Q07092 1604 aaPredicted RBP17.74■□□□□ 0.43
CTDP1-201ENST00000075430 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 EIF2AK2P19525 551 aaKnown RBP17.73■□□□□ 0.43
CTDP1-201ENST00000075430 KCNT1Q5JUK3 1230 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 RASIP1Q5U651 963 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 CYFIP1Q7L576 1253 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 CCNJLQ8IV13 435 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 GTPBP10A4D1E9 387 aaKnown RBP17.73■□□□□ 0.43
CTDP1-201ENST00000075430 POLR2MP0CAP2 368 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 TPBGLP0DKB5 382 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 ETS2P15036 469 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 AP3B2Q13367 1082 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 SNRNP35Q16560 246 aaKnown RBP17.73■□□□□ 0.43
CTDP1-201ENST00000075430 TMEM270Q6UE05 265 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 ANKS1BQ7Z6G8 1248 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 DAW1Q8N136 415 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 CFAP61Q8NHU2 1237 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 CLPTM1LQ96KA5 538 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 FAM161BQ96MY7 647 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 SREBF1P36956 1147 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 ACOT2P49753 483 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 KLC1Q07866 573 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 C11orf63Q6NUN7 778 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 OTOAQ7RTW8 1153 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 ZWILCHQ9H900 591 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 FAM198AQ9UFP1 575 aa17.73■□□□□ 0.43
CTDP1-201ENST00000075430 HNRNPDLO14979 420 aaKnown RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 NVLO15381 856 aaKnown RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 SNX30Q5VWJ9 437 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 FYB2Q5VWT5 728 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 LMO3Q8TAP4 145 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 ZNF668Q96K58 619 aaPredicted RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 FGFR1P11362 822 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 SERPINB3P29508 390 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 SERPINB4P48594 390 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 THOC5Q13769 683 aaKnown RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 RBBP5Q15291 538 aaKnown RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 CEP55Q53EZ4 464 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 OGFOD1Q8N543 542 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 KIFAP3Q92845 792 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 MASTLQ96GX5 879 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 SLC17A7Q9P2U7 560 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 TESPA1A2RU30 521 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms