RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 CRELD2Q6UXH1 353 aaPredicted RBP11.33□□□□□ -0.6
CD4-201ENST00000011653 PPM1KQ8N3J5 372 aa11.33□□□□□ -0.6
CD4-201ENST00000011653 OR5B17Q8NGF7 314 aa11.33□□□□□ -0.6
CD4-201ENST00000011653 CXCL16Q9H2A7 254 aa11.33□□□□□ -0.6
CD4-201ENST00000011653 PDZD7Q9H5P4 517 aa11.33□□□□□ -0.6
CD4-201ENST00000011653 SNTG2Q9NY99 539 aa11.33□□□□□ -0.6
CD4-201ENST00000011653 OGTO15294 1046 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 CHRNA1P02708 482 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 EPHB4P54760 987 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 TDRD12Q587J7 1177 aaKnown RBP11.32□□□□□ -0.6
CD4-201ENST00000011653 ZNF618Q5T7W0 954 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 SPOPLQ6IQ16 392 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 TAF2Q6P1X5 1199 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 PDXDC1Q6P996 788 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 TAS1R2Q8TE23 839 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 BORCS6Q96GS4 357 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 NOX5Q96PH1 765 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 MTMR12Q9C0I1 747 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 TMEM117Q9H0C3 514 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
CD4-201ENST00000011653 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
CD4-201ENST00000011653 RPF1Q9H9Y2 349 aaKnown RBP11.32□□□□□ -0.6
CD4-201ENST00000011653 LUC7LQ9NQ29 371 aaKnown RBP11.32□□□□□ -0.6
CD4-201ENST00000011653 SSU72P8A0A1W2PR75 194 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 AMHR2Q16671 573 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 ZPBP2Q6X784 338 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 SV2AQ7L0J3 742 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 ZNF410Q86VK4 478 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 SLC9A9Q8IVB4 645 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 BAP1Q92560 729 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 KAT5Q92993 513 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 PSMB7Q99436 277 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 MKNK1Q9BUB5 465 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 STIM2Q9P246 746 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 DMGDHQ9UI17 866 aaKnown RBP11.32□□□□□ -0.6
CD4-201ENST00000011653 ST3GAL5Q9UNP4 418 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 ATP11BQ9Y2G3 1177 aa11.32□□□□□ -0.6
CD4-201ENST00000011653 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 OPA1O60313 960 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 PON1P27169 355 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 CCL23P55773 120 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 C1orf220Q5T0J3 134 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 C8orf74Q6P047 294 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 EMBQ6PCB8 327 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 ZC3H3Q8IXZ2 948 aaKnown RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 RUFY1Q96T51 708 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 NUCKS1Q9H1E3 243 aaKnown RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 HOXA11P31270 313 aaPredicted RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 CXCR5P32302 372 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 NAP1L1P55209 391 aaKnown RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 CETN1Q12798 172 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 SERINC5Q86VE9 423 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 FAM228AQ86W67 206 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 RNF10Q8N5U6 811 aaKnown RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 HDAC7Q8WUI4 952 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 LPPQ93052 612 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 AJAP1Q9UKB5 411 aaPredicted RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 MOXD2PA6NHM9 499 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 MEIS3P2A8K0S8 358 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 SHOX2O60902 331 aaPredicted RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 CALCAP01258 141 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 TMEM191BP0C7N4 346 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 PIK3CAP42336 1068 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 GFPT1Q06210 699 aaPredicted RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 SCARA5Q6ZMJ2 495 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 HINFPQ9BQA5 517 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 INTS2Q9H0H0 1204 aaKnown RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 SEPT11Q9NVA2 429 aaKnown RBP11.31□□□□□ -0.6
CD4-201ENST00000011653 CACNG4Q9UBN1 327 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 TNFSF13BQ9Y275 285 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 TRPV2Q9Y5S1 764 aa11.31□□□□□ -0.6
CD4-201ENST00000011653 SCN10AQ9Y5Y9 1956 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 LACTBL1A8MY62 500 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 LDHAP00338 332 aaKnown RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 CST5P28325 142 aaPredicted RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 TNFRSF8P28908 595 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 MAGEA9P43362 315 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 CTCFP49711 727 aaPredicted RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 CRYBB1P53674 252 aaPredicted RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 MARSP56192 900 aaKnown RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 CFAP221Q4G0U5 840 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 GLE1Q53GS7 698 aaKnown RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 SCLYQ96I15 445 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 PAWRQ96IZ0 340 aaKnown RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 PRDM5Q9NQX1 630 aaPredicted RBP11.3□□□□□ -0.6
CD4-201ENST00000011653 CEP72Q9P209 647 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 RNF14Q9UBS8 474 aa11.3□□□□□ -0.6
CD4-201ENST00000011653 UMODL1Q5DID0 1318 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms