RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Eif4bQ8BGD9 611 aaKnown RBP16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 A430089I19RikQ8C9W1 407 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cog3Q8CI04 820 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Lman1Q9D0F3 517 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Dpy19l4A2AJQ3 722 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 EloblA6PWE0 161 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 NfkbieO54910 364 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 NsfP46460 744 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Upf3bQ3ULL6 472 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Xkr4Q5GH67 647 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 GneQ91WG8 722 aaKnown RBP16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Dydc1Q9D9T0 175 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Pex5O09012 639 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Tnnc2P20801 160 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rbp3P49194 1234 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 TdgP56581 421 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Tmprss11aQ3UQ41 389 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Foxo6Q70KY4 559 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Usp6nlQ80XC3 819 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rufy1Q8BIJ7 712 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Slc7a14Q8BXR1 771 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Msgn1Q9JK54 188 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gm44511A0A0N4SW10 223 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Plekha5E9Q6H8 1269 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Klrb1bP27812 223 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 IppP28575 584 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Irs1P35569 1233 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Bbof1Q3V079 533 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Trmt13Q8BYH3 481 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Taf2Q8C176 1104 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ccdc134Q8C7V8 229 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ccdc15Q8C9M2 810 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Sept3Q9Z1S5 350 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 SprtnG3X912 497 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Tlk2O55047 718 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Sh3bp2Q06649 559 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Nfe2Q07279 373 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rnf180Q3U827 592 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Git1Q68FF6 770 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Znf12Q7TSI0 686 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Map4k3Q99JP0 894 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Fam133bQ9CVI2 245 aaKnown RBP16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Fam173bQ9D1Z3 247 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cables1Q9ESJ1 568 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 PlekQ9JHK5 350 aaKnown RBP16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Kank3Q9Z1P7 791 aa16.9■□□□□ 0.3
Trim39-203ENSMUST00000113706 Vmn2r87E9PZX4 848 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Serpinh1P19324 417 aaKnown RBP16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Klra1P20937 262 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ccr5P51682 354 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Hace1Q3U0D9 909 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ndufaf2Q59J78 168 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Samhd1Q60710 627 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tfap2bQ61313 459 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 SpopQ6ZWS8 374 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fbxo38Q8BMI0 1194 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ccdc91Q9D8L5 442 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Xab2Q9DCD2 855 aaKnown RBP16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Slc5a4aQ9ET37 656 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Atp6v0a1Q9Z1G4 839 aaKnown RBP16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Pitpnm1O35954 1243 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ass1P16460 412 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Oas1fQ14AZ4 364 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Odr4Q4PJX1 447 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 GopcQ8BH60 463 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fam49aQ8BHZ0 323 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Mis12Q9CY25 206 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 ArpinQ9D0A3 226 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Capn12Q9ER56 720 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Edf1Q9JMG1 148 aaKnown RBP16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gadd45gQ9Z111 159 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Rasgrp1Q9Z1S3 795 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fbf1A2A870 1173 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 CaluO35887 315 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Slc1a1P51906 523 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Eef1dP57776 281 aaKnown RBP16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Pou6f1Q07916 301 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Mfhas1Q3V1N1 1048 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 HarsQ61035 509 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Adcy2Q80TL1 1090 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fnbp1Q80TY0 616 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Myef2Q8C854 591 aaKnown RBP16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Lsm14bQ8CGC4 385 aaKnown RBP16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Rnf181Q9CY62 165 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Slc40a1Q9JHI9 570 aa16.89■□□□□ 0.29
Trim39-203ENSMUST00000113706 Syngap1F6SEU4 1340 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 TroapB7ZNG4 668 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ccdc24E9PUW8 296 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Samd15F6XZJ7 620 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Rgs9bpQ148R9 237 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Stip1Q60864 543 aaKnown RBP16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ccdc181Q80ZU5 509 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Rap1gapA2ALS5 663 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tatdn2B7ZNL9 783 aaKnown RBP16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ctnna1P26231 906 aaKnown RBP16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 RelaQ04207 549 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Wdr41Q3UDP0 460 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Nacc1Q7TSZ8 514 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Snx14Q8BHY8 964 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 AopepQ8BXQ6 817 aa16.88■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms