RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Mbd2Q9Z2E1 414 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Rnf19bA2A7Q9 732 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Ifi213D3Z5G0 586 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Slc9a1Q61165 820 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Itih2Q61703 946 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Atp4aQ64436 1033 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Slc44a2Q8BY89 706 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Wdr24Q8CFJ9 790 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 HpgdQ8VCC1 269 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Q99LU8 229 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 H2-EaP01904 255 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 P04224 255 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Fgd2Q8BY35 655 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Tex13bQ99MW5 186 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 CcniQ9Z2V9 377 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Plcg1Q62077 1302 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Gm29554A0A087WNW4 188 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Gm3127E9Q9P5 263 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Gm3453K7N724 263 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Pkp1P97350 728 aaKnown RBP17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Carmil2Q3V3V9 1296 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Slc9a2Q3ZAS0 814 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Mfn2Q80U63 757 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Phf23Q8BSN5 401 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Adgra1Q8C4G9 578 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Psma4Q9R1P0 261 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Adgrf5G5E8Q8 1348 aa17.33■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Gm5814J3QP80 125 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Clk2O35491 499 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Man1a1P45700 655 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Spink5Q148R4 1017 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Krr1Q8BGA5 380 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Rft1Q8C3B8 541 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 H2afyQ9QZQ8 372 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Caskin1Q6P9K8 1431 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Olfr292F8VQ84 308 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Taf13P61216 124 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Tex11Q14AT2 947 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Odr4Q4PJX1 447 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Zbtb46Q8BID6 600 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Hus1Q8BQY8 280 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Nox1Q8CIZ9 591 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Gpr1Q8K087 353 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Npm3Q9CPP0 175 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 AI481877A2ALV5 1481 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 EXOC1LB9EK06 172 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Phkg1P07934 388 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Oas1fQ14AZ4 364 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Hist2h2acQ64523 129 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Hist2h2aa1Q6GSS7 130 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Ireb2Q811J3 963 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Dyrk4Q8BI55 632 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Pnma3Q8JZW8 466 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Zbtb1Q91VL9 713 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Cyp39a1Q9JKJ9 470 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Khdrbs3Q9R226 346 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Pcf11G3X9Z4 1553 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Lbhd1A0A087WPA0 259 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Hsd17b4P51660 735 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Vps11Q91W86 941 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Rgs2O08849 211 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 EpoP07321 192 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Zfp341Q6PGC9 846 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Taf5lQ91WQ5 589 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 GabrqQ9JLF1 638 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Vmn2r121A2BE32 847 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Msh2P43247 935 aaKnown RBP17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Il17raQ60943 864 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Klhl17Q6TDP3 640 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Gpc1Q9QZF2 557 aa17.32■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Vmn2r4K7N784 913 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Rgs4O08899 205 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Stat4P42228 749 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Gemin4Q6P6L6 1058 aaKnown RBP17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Wnk4Q80UE6 1222 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Fam151aQ8QZW3 608 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Mettl7bQ9DD20 244 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Acad12D3Z7X0 555 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Srsf11E9Q6E5 511 aaKnown RBP17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Aldh3a2P47740 484 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Glra4Q61603 456 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Xlr3cQ61806 226 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Wdsub1Q9D0I6 474 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Cbx8Q9QXV1 362 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Adcy9P51830 1353 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 HdcP23738 662 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Actr2P61161 394 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 LdhdQ7TNG8 484 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 QkiQ9QYS9 341 aaKnown RBP17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 1700016G14RikA0A286YCZ6 238 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Farp1F8VPU2 1048 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Defb15Q8R2I5 79 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Ndufs3Q9DCT2 263 aaKnown RBP17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Atg4a-psA0A0G2JFS9 396 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Vmn2r7E9PYL5 915 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Slc39a2G3X943 309 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Vmn2r3H3BJ88 915 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Vmn2r6H3BK29 913 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Rrm2P11157 390 aa17.31■□□□□ 0.36
Ubr3-202ENSMUST00000112251 Plcl1Q3USB7 1096 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms