RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Ccdc125Q5U465 500 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ccdc117Q6PB51 277 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Slc9c1Q6UJY2 1175 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Rccd1Q8BTU7 377 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Uba6Q8C7R4 1053 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Zcchc8Q9CYA6 709 aaKnown RBP11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Polr3cQ9D483 533 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 AunipE9Q6Z5 340 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Klc1O88447 541 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Cst8P32766 142 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 RalaP63321 206 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Xlr3bQ6P205 226 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Tnpo2Q99LG2 887 aaKnown RBP11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Nsmce1Q9D720 266 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Olr1Q9EQ09 363 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 PapolbQ9WVP6 641 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ptgdr2Q9Z2J6 382 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Znf536Q8K083 1302 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Atrnl1Q6A051 1378 aa11.32□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Fam81bA0A140LI28 432 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Unc13dB2RUP2 1085 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ptpn20O55082 426 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Pdk4O70571 412 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Fmr1P35922 614 aaKnown RBP11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Agbl1Q09M05 972 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Kmt5aQ2YDW7 349 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ntrk3Q6VNS1 825 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Tbc1d22bQ80VE5 505 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 AarsQ8BGQ7 968 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 D630039A03RikQ8K0M7 236 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Uroc1Q8VC12 676 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Cd300ldQ8VCH2 221 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Dtnbp1Q91WZ8 352 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Polr3fQ921X6 316 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Trmt10bQ9D075 318 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 FibpQ9JI19 357 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ecel1Q9JMI0 775 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ccdc170D3YXL0 722 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Tgfb2P27090 414 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Eef1dP57776 281 aaKnown RBP11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Fam193bQ3U2K0 892 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Pid1Q3UBG2 217 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Nsun6Q7TS68 476 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Kbtbd3Q8BHI4 607 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Coq6Q8R1S0 476 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Vps36Q91XD6 386 aa11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Fip1l1Q9D824 581 aaKnown RBP11.31□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Apba1B2RUJ5 842 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Wdr95D3Z7A8 784 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Spata31d1dE9Q5W2 1247 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Cd70O55237 195 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 PrkceP16054 737 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Clk1P22518 483 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Tulp2P46686 562 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Aars2Q14CH7 980 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ctnna2Q61301 953 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Six1Q62231 284 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Retreg2Q6NS82 541 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Mcph1Q7TT79 822 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Slc9a9Q8BZ00 644 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Efl1Q8C0D5 1127 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Lin7aQ8JZS0 233 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Usp11Q99K46 921 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Med10Q9CXU0 135 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 RptorQ8K4Q0 1335 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Gm45837F7D3W5 961 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 NsfP46460 744 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Mmp20P57748 482 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Tarbp2P97473 365 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 GabpaQ00422 454 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Cdca2Q14B71 982 aaKnown RBP11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Bpifb5Q3UQ05 490 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Capn13Q3UW68 665 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Oog4Q4G0C7 502 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Mks1Q5SW45 561 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Dsg1aQ61495 1057 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Rhbdf2Q80WQ6 827 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ugt3a2Q8JZZ0 523 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Ppp1r16bQ8VHQ3 568 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Snapc2Q91XA5 359 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Pde2aQ922S4 916 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Bco2Q99NF1 532 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Mettl16Q9CQG2 553 aaKnown RBP11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Arhgef25Q9CWR0 618 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Rnf6Q9DBU5 667 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Noa1Q9JJG9 693 aaKnown RBP11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Olig1Q9JKN5 260 aa11.3□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Arhgef10lA2AWP8 1280 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Gm5926E9PWJ8 236 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Pitpnm1O35954 1243 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Banf1O54962 89 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Rpl7aP12970 266 aaKnown RBP11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Erbb2P70424 1256 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Tff2Q03404 129 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 HnrnpdQ60668 355 aaKnown RBP11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Birc2Q62210 612 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 NostrinQ6WKZ7 506 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 L3mbtl3Q8BLB7 883 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Fsd1lQ8BYN5 507 aa11.29□□□□□ -0.6
Ptcd1-201ENSMUST00000031628 Adgra1Q8C4G9 578 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms