RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 FAM81BQ96LP2 452 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 FHDC1Q9C0D6 1143 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-229ENST00000641891 SNX24Q9Y343 169 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 NOP56O00567 594 aaKnown RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 CYP1A1P04798 512 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 NCOA4Q13772 614 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 DHX34Q14147 1143 aaKnown RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 SIX1Q15475 284 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 CLUL1Q15846 466 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 RNF149Q8NC42 400 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 FAM212AQ96EL1 285 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 MMP19Q99542 508 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 CAPS2Q9BXY5 557 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 ZDHHC18Q9NUE0 388 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 FAM187AA6NFU0 413 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 CXCL11O14625 94 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 SLC25A27O95847 323 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 CST3P01034 146 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 RARAP10276 462 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 GNA15P30679 374 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 NSFP46459 744 aaKnown RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 IRAK1P51617 712 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 RWDD2BP57060 319 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 GNGT1P63211 74 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 DHX9Q08211 1270 aaKnown RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 PPP2R5EQ16537 467 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 MON1BQ7L1V2 547 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 ZNF677Q86XU0 584 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 RBBP8NLQ8NC74 664 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 BBXQ8WY36 941 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-229ENST00000641891 OPTNQ96CV9 577 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 TCHPQ9BT92 498 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 RABEP2Q9H5N1 569 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 LRRC4CQ9HCJ2 640 aa18.13■□□□□ 0.49
PHGDH-229ENST00000641891 MCM3APO60318 1980 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 HSPA6P17066 643 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 CHRNA3P32297 505 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 CENPCQ03188 943 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 ZNF844Q08AG5 666 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 PLCB4Q15147 1175 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 CCDC137Q6PK04 289 aaKnown RBP18.12■□□□□ 0.49
PHGDH-229ENST00000641891 BRSK2Q8IWQ3 736 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 FAM167AQ96KS9 214 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 SPATA33Q96N06 139 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 FMO2Q99518 471 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 C11orf70Q9BRQ4 267 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 MRPL4Q9BYD3 311 aaKnown RBP18.12■□□□□ 0.49
PHGDH-229ENST00000641891 MTMR12Q9C0I1 747 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 CENPHQ9H3R5 247 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 TMBIM4Q9HC24 238 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.12■□□□□ 0.49
PHGDH-229ENST00000641891 KCNH4Q9UQ05 1017 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 GRIN2DO15399 1336 aa18.12■□□□□ 0.49
PHGDH-229ENST00000641891 DNAJC25-GNG10A0A024R161 153 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 LGR5O75473 907 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 PRKCBP05771 671 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 KCNJ1P48048 391 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 BPIFB4P59827 614 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 IER5Q5VY09 327 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 CDCA2Q69YH5 1023 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-229ENST00000641891 ZDHHC24Q6UX98 284 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 LRIG3Q6UXM1 1119 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 ZPBP2Q6X784 338 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 ATP6V1G3Q96LB4 118 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 ACO2Q99798 780 aaKnown RBP18.11■□□□□ 0.49
PHGDH-229ENST00000641891 AVENQ9NQS1 362 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-229ENST00000641891 PDGFCQ9NRA1 345 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 ATP8A1Q9Y2Q0 1164 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 PTPN22Q9Y2R2 807 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 TOM1L1O75674 476 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 GJB6O95452 261 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 RPL21P46778 160 aaKnown RBP18.11■□□□□ 0.49
PHGDH-229ENST00000641891 PLTPP55058 493 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 NOMO3P69849 1222 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 SKOR1P84550 965 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 PPIL2Q13356 520 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 PDCLQ13371 301 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 KCTD2Q14681 263 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 CDR2LQ86X02 465 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-229ENST00000641891 RHPN2Q8IUC4 686 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 ABRAQ8N0Z2 381 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 GRHL1Q9NZI5 618 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 PCYOX1Q9UHG3 505 aa18.11■□□□□ 0.49
PHGDH-229ENST00000641891 MYO1FO00160 1098 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 ABLIM1O14639 778 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 THAP12O43422 761 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 EFNA5P52803 228 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 SKIDA1Q1XH10 827 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 GPAT2Q6NUI2 795 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 DHX37Q8IY37 1157 aaKnown RBP18.1■□□□□ 0.49
PHGDH-229ENST00000641891 FBXO25Q8TCJ0 367 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 HERPUD2Q9BSE4 406 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 TXLNGYQ9BZA5 131 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 RASAL2Q9UJF2 1139 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 O00370 1275 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 NF2P35240 595 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 COILP38432 576 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-229ENST00000641891 MYL6P60660 151 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 PPARDQ03181 441 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 CYP1B1Q16678 543 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms