RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SCN10AQ9Y5Y9 1956 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 LRRN2O75325 713 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 NDUFA10O95299 355 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 PLEKP08567 350 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 CLTAP09496 248 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 STAG3L1P0CL83 205 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 EIF4BP23588 611 aaKnown RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 CYLC1P35663 651 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 EIF4A3P38919 411 aaKnown RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 STAT1P42224 750 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 ACLYP53396 1101 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 AP3M2P53677 418 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 MRPS6P82932 125 aaKnown RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 SKIV2LQ15477 1246 aaKnown RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 ENOX2Q16206 610 aaKnown RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 KYAT1Q16773 422 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 ZACNQ401N2 412 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 HGSNATQ68CP4 663 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 RSPH3Q86UC2 560 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 WDR49Q8IV35 697 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 ARHGEF19Q8IW93 802 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 REXO1L1PQ8IX06 675 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 CEP120Q8N960 986 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 ACRBPQ8NEB7 543 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 VTI1AQ96AJ9 217 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 FAM212AQ96EL1 285 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 CELF4Q9BZC1 486 aaKnown RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 RPF1Q9H9Y2 349 aaKnown RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 UBE2TQ9NPD8 197 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-221ENST00000641573 RAB20Q9NX57 234 aa14.14□□□□□ -0.15
PHGDH-221ENST00000641573 MOXD2PA6NHM9 499 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 IL18RAPO95256 599 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 HLA-DRAP01903 254 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 HOXA11P31270 313 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-221ENST00000641573 POU5F1Q01860 360 aaKnown RBP14.13□□□□□ -0.15
PHGDH-221ENST00000641573 ARID5AQ03989 594 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 PTPN11Q06124 597 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-221ENST00000641573 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-221ENST00000641573 BIRC3Q13489 604 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 ITGA7Q13683 1181 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 DRAP1Q14919 205 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-221ENST00000641573 DCAF4L1Q3SXM0 396 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 TDRD12Q587J7 1177 aaKnown RBP14.13□□□□□ -0.15
PHGDH-221ENST00000641573 TMEM240Q5SV17 173 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 TDRD10Q5VZ19 366 aaKnown RBP14.13□□□□□ -0.15
PHGDH-221ENST00000641573 APBB1IPQ7Z5R6 666 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-221ENST00000641573 SERINC5Q86VE9 423 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 TMEM192Q8IY95 271 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 OR5B17Q8NGF7 314 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 TMEM40Q8WWA1 233 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 CCDC42Q96M95 316 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 NT5C1BQ96P26 610 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 ADPGKQ9BRR6 497 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 LRFN3Q9BTN0 628 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.153e-8■■■■■ 240.4
PHGDH-221ENST00000641573 TRPV2Q9Y5S1 764 aa14.13□□□□□ -0.15
PHGDH-221ENST00000641573 MYO9BQ13459 2157 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 SSU72P8A0A1W2PR75 194 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 GOLGA6L9A6NEM1 432 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 EIF3CLB5ME19 914 aaKnown RBP14.12□□□□□ -0.15
PHGDH-221ENST00000641573 F8VZ95 297 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 M0QZ92 97 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 ZC3H11AO75152 810 aaKnown RBP eCLIP14.12□□□□□ -0.15
PHGDH-221ENST00000641573 VNN1O95497 513 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 NPTXRO95502 500 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 RPLP2P05387 115 aaKnown RBP14.12□□□□□ -0.15
PHGDH-221ENST00000641573 CXCL8P10145 99 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 BMP1P13497 986 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 CSF2RAP15509 400 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 FERP16591 822 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 AXLP30530 894 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 SOX5P35711 763 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 PIK3CAP42336 1068 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 KLHL30Q0D2K2 578 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 PTGISQ16647 500 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 ARHGAP44Q17R89 818 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 TMEM31Q5JXX7 168 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 NOTUMQ6P988 496 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 IRF2BP2Q7Z5L9 587 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 WNT8BQ93098 351 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 C16orf45Q96MC5 204 aaPredicted RBP14.12□□□□□ -0.15
PHGDH-221ENST00000641573 GLT1D1Q96MS3 346 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 EIF3CQ99613 913 aaKnown RBP14.12□□□□□ -0.15
PHGDH-221ENST00000641573 GPR88Q9GZN0 384 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 DEF6Q9H4E7 631 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 TBX21Q9UL17 535 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 REXO2Q9Y3B8 237 aaKnown RBP14.12□□□□□ -0.15
PHGDH-221ENST00000641573 CDY2AQ9Y6F7 541 aa14.12□□□□□ -0.15
PHGDH-221ENST00000641573 PIEZO1Q92508 2521 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 LACTBL1A8MY62 500 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 AKR1B10O60218 316 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 B4GALT4O60513 344 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 PHACTR2O75167 634 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 GFPT2O94808 682 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 PNMA6AP0CW24 399 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-221ENST00000641573 GRM5P41594 1212 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 PRKCIP41743 596 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 KIF11P52732 1056 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 MFAP3P55082 362 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 KRT83P78385 493 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms