RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 XPOTO43592 962 aaKnown RBP14.29□□□□□ -0.12
GTF3A-209ENST00000640289 TMEM191BP0C7N4 346 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 TNNI1P19237 187 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 DNAJB1P25685 340 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 LRPAP1P30533 357 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 PPM1AP35813 382 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 PSMC2P35998 433 aaKnown RBP14.29□□□□□ -0.12
GTF3A-209ENST00000640289 PLCB3Q01970 1234 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 TYRO3Q06418 890 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 SURF1Q15526 300 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 STX1AQ16623 288 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 CD300LGQ6UXG3 332 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 NT5DC4Q86YG4 428 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 CSGALNACT2Q8N6G5 542 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 PARD3BQ8TEW8 1205 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 POF1BQ8WVV4 589 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 ZNF516Q92618 1163 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 TMEM169Q96HH4 297 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 UROC1Q96N76 676 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 TSPAN18Q96SJ8 248 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 COLEC11Q9BWP8 271 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 VN1R3Q9BXE9 311 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 MTMR12Q9C0I1 747 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 INTS13Q9NVM9 706 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 DPP3Q9NY33 737 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 DACH1Q9UI36 760 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 ADAM28Q9UKQ2 775 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 MAPK13O15264 365 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 B3GAT3O94766 335 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 TRIM49P0CI25 452 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 TRIM49CP0CI26 452 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 EPB41P11171 864 aaKnown RBP14.28□□□□□ -0.12
GTF3A-209ENST00000640289 BRCC3P46736 316 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 CAMK1Q14012 370 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 ADGRE1Q14246 886 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 RALGAPA2Q2PPJ7 1873 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 C1orf220Q5T0J3 134 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 DCLRE1AQ6PJP8 1040 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 FOXR2Q6PJQ5 311 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 TAS1R1Q7RTX1 841 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 WDR49Q8IV35 697 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 C1orf127Q8N9H9 656 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 DDX27Q96GQ7 796 aaKnown RBP14.28□□□□□ -0.12
GTF3A-209ENST00000640289 BORCS6Q96GS4 357 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 ANKRD36BP1Q96IX9 119 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 CEP63Q96MT8 703 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 GUCD1Q96NT3 240 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 MKNK1Q9BUB5 465 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 SRRTQ9BXP5 876 aaKnown RBP14.28□□□□□ -0.12
GTF3A-209ENST00000640289 GPR62Q9BZJ7 368 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 DNAJC25Q9H1X3 360 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 ANO10Q9NW15 660 aa14.28□□□□□ -0.12
GTF3A-209ENST00000640289 ANO9A1A5B4 782 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 CARNS1A5YM72 827 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 TMEM189-UBE2V1I3L0A0 370 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 I3L4J1 428 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 SLC16A3O15427 465 aaKnown RBP14.27□□□□□ -0.13
GTF3A-209ENST00000640289 TADA2AO75478 443 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 EFEMP2O95967 443 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 ITGB3P05106 788 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 KRT13P13646 458 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 ERCC5P28715 1186 aaPredicted RBP14.27□□□□□ -0.13
GTF3A-209ENST00000640289 RPL9P32969 192 aaKnown RBP14.27□□□□□ -0.13
GTF3A-209ENST00000640289 IRS1P35568 1242 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 VAMP7P51809 220 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 ERVFC1P60507 584 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 KRT17Q04695 432 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 BFSP1Q12934 665 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 ZSCAN23Q3MJ62 389 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 FUT10Q6P4F1 479 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.13
GTF3A-209ENST00000640289 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.13
GTF3A-209ENST00000640289 CXorf38Q8TB03 319 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 TMC2Q8TDI7 906 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 CACTINQ8WUQ7 758 aaKnown RBP14.27□□□□□ -0.13
GTF3A-209ENST00000640289 MYLIPQ8WY64 445 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 B3GALT6Q96L58 329 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 CDX2Q99626 313 aaPredicted RBP14.27□□□□□ -0.13
GTF3A-209ENST00000640289 FUCA2Q9BTY2 467 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 MTMR10Q9NXD2 777 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 SIX4Q9UIU6 781 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 PCDHGC5Q9Y5F6 944 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.13
GTF3A-209ENST00000640289 TDRD15B5MCY1 1934 aaKnown RBP14.26□□□□□ -0.13
GTF3A-209ENST00000640289 PIRO00625 290 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 LETM1O95202 739 aaPredicted RBP14.26□□□□□ -0.13
GTF3A-209ENST00000640289 TNNC2P02585 160 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 KRT19P08727 400 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 POLR2BP30876 1174 aaKnown RBP14.26□□□□□ -0.13
GTF3A-209ENST00000640289 CLDN10P78369 228 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 DUOXA2Q1HG44 320 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 ANO6Q4KMQ2 910 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 TRAPPC11Q7Z392 1133 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
GTF3A-209ENST00000640289 VPS52Q8N1B4 723 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 AUTS2Q8WXX7 1259 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 MMRN2Q9H8L6 949 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms