RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	TRPC1	P48995	793 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	GPC5	P78333	572 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	HEATR4	Q86WZ0	1026 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	TMEM120A	Q9BXJ8	343 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	STX18	Q9P2W9	335 aa	Known RBP	11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	MROH5	Q6ZUA9	1318 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	KDM6A	O15550	1401 aa	Predicted RBP	11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	RIMBP3C	A6NJZ7	1639 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	RIMBP3B	A6NNM3	1639 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	RIMBP3	Q9UFD9	1639 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	FCHO1	O14526	889 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	HDAC4	P56524	1084 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	SLC45A4	Q5BKX6	768 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	SPATA20	Q8TB22	786 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	SCFD2	Q8WU76	684 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	TTC25	Q96NG3	672 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	PURB	Q96QR8	312 aa	Known RBP	11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	PCDHGA4	Q9Y5G9	962 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	MAD1L1	Q9Y6D9	718 aa		11.97	□□□□□ -0.49
SPIN3-231	ENST00000639895	TMEM94	Q12767	1356 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	NBPF26	B4DH59	902 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	KRT8	P05787	483 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	GYS1	P13807	737 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	GFAP	P14136	432 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	TUFM	P49411	452 aa	Known RBP	11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	BASP1	P80723	227 aa	Known RBP	11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	FOXO4	P98177	505 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	GPS1	Q13098	491 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	EFHC1	Q5JVL4	640 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	ATG9A	Q7Z3C6	839 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	GPR141	Q7Z602	305 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	NLRP10	Q86W26	655 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	TMPRSS6	Q8IU80	811 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	NBPF15	Q8N660	670 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	TBC1D16	Q8TBP0	767 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	CCSER1	Q9C0I3	900 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	HERC5	Q9UII4	1024 aa	Known RBP	11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	PRELID1	Q9Y255	219 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	RNF103-CHMP3	A0A140T963	221 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	DDHD2	O94830	711 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	PDE8B	O95263	885 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	TNFAIP8	O95379	198 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	ASL	P04424	464 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	NEK3	P51956	506 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	INHBE	P58166	350 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	DYNLT1	P63172	113 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	MYL7	Q01449	175 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	PAF1	Q8N7H5	531 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	SPOCK2	Q92563	424 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	ZFR	Q96KR1	1074 aa	Known RBP	11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	PLGRKT	Q9HBL7	147 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	SAP30BP	Q9UHR5	308 aa	Known RBP	11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	ANAPC7	Q9UJX3	599 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	STRIP2	Q9ULQ0	834 aa		11.96	□□□□□ -0.49
SPIN3-231	ENST00000639895	KLRF2	D3W0D1	207 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	CHMP2A	O43633	222 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	STMN1	P16949	149 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	CDH3	P22223	829 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	CLCN2	P51788	898 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	PDIA5	Q14554	519 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	TMEM132A	Q24JP5	1023 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	ACSBG2	Q5FVE4	666 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	RIPOR1	Q6ZS17	1223 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	PDIK1L	Q8N165	341 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	CATSPER1	Q8NEC5	780 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	SYN2	Q92777	582 aa	Predicted RBP	11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	SEMA6B	Q9H3T3	888 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	PCDH18	Q9HCL0	1135 aa		11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.96	□□□□□ -0.5
SPIN3-231	ENST00000639895	C1orf232	A0A0U1RR37	186 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	FAM58BP	P0C7Q3	252 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	HMOX2	P30519	316 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	ADCY7	P51828	1080 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	HPCA	P84074	193 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	CYP4A11	Q02928	519 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	COASY	Q13057	564 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	PDAP1	Q13442	181 aa	Known RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	ITGA9	Q13797	1035 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	CEP55	Q53EZ4	464 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	BSPRY	Q5W0U4	402 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	ATP8B4	Q8TF62	1192 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	ATG4A	Q8WYN0	398 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	PRDM16	Q9HAZ2	1276 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	GPCPD1	Q9NPB8	672 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	PTTG2	Q9NZH5	202 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	STARD13	Q9Y3M8	1113 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	AK5	Q9Y6K8	562 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	TRMU	O75648	421 aa	Known RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	PSMC3	P17980	439 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	COMT	P21964	271 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	HIRA	P54198	1017 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	TMEM53	Q6P2H8	277 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	CYP4X1	Q8N118	509 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms