RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 NHLH1Q02575 133 aa16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 AXDND1Q5T1B0 1012 aaPredicted RBP16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 KRI1Q8N9T8 703 aaKnown RBP16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 C18orf25Q96B23 403 aaPredicted RBP16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 MYADMQ96S97 322 aa16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 TSPAN18Q96SJ8 248 aa16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 ZHX3Q9H4I2 956 aa16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 ZSCAN16Q9H4T2 348 aaPredicted RBP16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 FBXO2Q9UK22 296 aaPredicted RBP16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 DUSP12Q9UNI6 340 aa16.96■□□□□ 0.31
PTPRVP-204ENST00000639439 CITO14578 2027 aa16.96■□□□□ 0.3
PTPRVP-204ENST00000639439 I3L4J1 428 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 OGTO15294 1046 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 MEFVO15553 781 aaPredicted RBP16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 XPOTO43592 962 aaKnown RBP16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 CXCL8P10145 99 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 FSHRP23945 695 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 MARCKSP29966 332 aaPredicted RBP16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 PPP2R3AQ06190 1150 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 SEZ6Q53EL9 994 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 VARS2Q5ST30 1063 aaKnown RBP16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 SLC8B1Q6J4K2 584 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 APPL2Q8NEU8 664 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 SLC7A14Q8TBB6 771 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 EPSTI1Q96J88 318 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 SUSD3Q96L08 255 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 IRF2BPLQ9H1B7 796 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 MFSD1Q9H3U5 465 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 SMOC2Q9H3U7 446 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 VWA8A3KMH1 1905 aa16.95■□□□□ 0.3
PTPRVP-204ENST00000639439 CACNA1HO95180 2353 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 TTC26A0AVF1 554 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 PDGFBP01127 241 aaPredicted RBP16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 LAMP2P13473 410 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 CYP3A5P20815 502 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 VCPP55072 806 aaKnown RBP16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 GTF2BQ00403 316 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 IER5LQ5T953 404 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 RRAGBQ5VZM2 374 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 RSPO2Q6UXX9 243 aaPredicted RBP16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 GET4Q7L5D6 327 aaPredicted RBP16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 GRASPQ7Z6J2 395 aaPredicted RBP16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 MAP4K3Q8IVH8 894 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 CD302Q8IX05 232 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 PRSS33Q8NF86 280 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 ZNF461Q8TAF7 563 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 KIF12Q96FN5 646 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 HAPLN2Q9GZV7 340 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 ST6GALNAC4Q9H4F1 302 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 RPF1Q9H9Y2 349 aaKnown RBP16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 UBQLN1Q9UMX0 589 aaKnown RBP16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 MTMR6Q9Y217 621 aa16.94■□□□□ 0.3
PTPRVP-204ENST00000639439 A0A0B4J269 797 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 CCL16O15467 120 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 STX6O43752 255 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 LRPAP1P30533 357 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 ELF1P32519 619 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 MCM4P33991 863 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 MRPL58Q14197 206 aaKnown RBP16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 SPECC1Q5M775 1068 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 FAM173BQ6P4H8 233 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 CCDC73Q6ZRK6 1079 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 USP49Q70CQ1 688 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 FIZ1Q96SL8 496 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 MSTO1Q9BUK6 570 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 SEL1LQ9UBV2 794 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 TUBGCP4Q9UGJ1 667 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 FBXL21Q9UKT6 434 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 CDH7Q9ULB5 785 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 POLIQ9UNA4 740 aa16.93■□□□□ 0.3
PTPRVP-204ENST00000639439 TBC1D4O60343 1298 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 ABLIM3O94929 683 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 ADRB2P07550 413 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 PAX3P23760 479 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 NMT1P30419 496 aaKnown RBP16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 CLCN5P51795 746 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 ROR1Q01973 937 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 CEBPZQ03701 1054 aaKnown RBP16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 SLC39A14Q15043 492 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 ZBTB6Q15916 424 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 TPGS2Q68CL5 300 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 ASTLQ6HA08 431 aaPredicted RBP16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 SLFN12LQ6IEE8 588 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 ZNF280DQ6N043 979 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 SV2BQ7L1I2 683 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 SLC44A3Q8N4M1 653 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 HVCN1Q96D96 273 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 USP28Q96RU2 1077 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 OXCT2Q9BYC2 517 aaPredicted RBP16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 WNT16Q9UBV4 365 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 KCNH3Q9ULD8 1083 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 MAFFQ9ULX9 164 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 PCDHB8Q9UN66 801 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 DOCK8Q8NF50 2099 aa16.92■□□□□ 0.3
PTPRVP-204ENST00000639439 WDFY4Q6ZS81 3184 aa16.91■□□□□ 0.3
PTPRVP-204ENST00000639439 ARHGEF37A1IGU5 675 aa16.91■□□□□ 0.3
PTPRVP-204ENST00000639439 LACTBL1A8MY62 500 aa16.91■□□□□ 0.3
PTPRVP-204ENST00000639439 ANHXE9PGG2 379 aa16.91■□□□□ 0.3
PTPRVP-204ENST00000639439 FAM189A1O60320 539 aa16.91■□□□□ 0.3
PTPRVP-204ENST00000639439 SRFP11831 508 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms