RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 HDAC7Q8WUI4 952 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 SMG7Q92540 1137 aaKnown RBP8.58□□□□□ -1.04
PNKP-229ENST00000637897 RAD54LQ92698 747 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 SYAP1Q96A49 352 aaPredicted RBP8.58□□□□□ -1.04
PNKP-229ENST00000637897 DNAJC19Q96DA6 116 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 DRC1Q96MC2 740 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 USP28Q96RU2 1077 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 ADPGKQ9BRR6 497 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 CCSER1Q9C0I3 900 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 C17orf75Q9HAS0 396 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.58□□□□□ -1.04
PNKP-229ENST00000637897 HCFC1R1Q9NWW0 138 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 EPS15L1Q9UBC2 864 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 DNMT3BQ9UBC3 853 aaKnown RBP8.58□□□□□ -1.04
PNKP-229ENST00000637897 STK39Q9UEW8 545 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 NR2E1Q9Y466 385 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 STK24Q9Y6E0 443 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 SCN1AP35498 2009 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 MYH15Q9Y2K3 1946 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 WDR27A2RRH5 827 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 MYMKA6NI61 221 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 PODXLO00592 558 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 TOM1L1O75674 476 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 ABLIM3O94929 683 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 SEC24AO95486 1093 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 PIGRP01833 764 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 CXCL8P10145 99 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 HARSP12081 509 aaKnown RBP8.57□□□□□ -1.04
PNKP-229ENST00000637897 ADSSP30520 456 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 OR1D2P34982 312 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 AARSP49588 968 aaKnown RBP eCLIP8.57□□□□□ -1.04
PNKP-229ENST00000637897 MTMR3Q13615 1198 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 HTR4Q13639 388 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 DHX8Q14562 1220 aaKnown RBP8.57□□□□□ -1.04
PNKP-229ENST00000637897 BMS1Q14692 1282 aaKnown RBP8.57□□□□□ -1.04
PNKP-229ENST00000637897 ENOX2Q16206 610 aaKnown RBP8.57□□□□□ -1.04
PNKP-229ENST00000637897 SLC5A9Q2M3M2 681 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 ZC2HC1CQ53FD0 456 aaPredicted RBP8.57□□□□□ -1.04
PNKP-229ENST00000637897 CRELD2Q6UXH1 353 aaPredicted RBP8.57□□□□□ -1.04
PNKP-229ENST00000637897 ZPBP2Q6X784 338 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 CCDC149Q6ZUS6 474 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 HAUS6Q7Z4H7 955 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 BRAPQ7Z569 592 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 GRASPQ7Z6J2 395 aaPredicted RBP8.57□□□□□ -1.04
PNKP-229ENST00000637897 GPBP1Q86WP2 473 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 HACE1Q8IYU2 909 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 SLC44A3Q8N4M1 653 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 FGF14Q92915 247 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 FAM84AQ96KN4 292 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 AK8Q96MA6 479 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 MFSD14AQ96MC6 490 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 ACAP3Q96P50 834 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 TIPINQ9BVW5 301 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 RAB34Q9BZG1 259 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 CRISPLD1Q9H336 500 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 PLEKHA4Q9H4M7 779 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 ZSCAN16Q9H4T2 348 aaPredicted RBP8.57□□□□□ -1.04
PNKP-229ENST00000637897 ZDHHC7Q9NXF8 308 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 TBX20Q9UMR3 447 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 DUSP12Q9UNI6 340 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 SSX2IPQ9Y2D8 614 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 BACE2Q9Y5Z0 518 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 CDY1Q9Y6F8 540 aa8.57□□□□□ -1.04
PNKP-229ENST00000637897 NCANO14594 1321 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 A0A0B4J269 797 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 LACTBL1A8MY62 500 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 SPTLC1O15269 473 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 CCL16O15467 120 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 MOSPD3O75425 235 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 NR1I2O75469 434 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 C8AP07357 584 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 LAMP2P13473 410 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 LRPAP1P30533 357 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 LONP1P36776 959 aaKnown RBP8.56□□□□□ -1.04
PNKP-229ENST00000637897 CCR2P41597 374 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 CASP5P51878 434 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 KRT85P78386 507 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 GTF2BQ00403 316 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 ROR1Q01973 937 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 NOLC1Q14978 699 aaKnown RBP eCLIP8.56□□□□□ -1.04
PNKP-229ENST00000637897 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 VARS2Q5ST30 1063 aaKnown RBP8.56□□□□□ -1.04
PNKP-229ENST00000637897 AXDND1Q5T1B0 1012 aaPredicted RBP8.56□□□□□ -1.04
PNKP-229ENST00000637897 SLC8B1Q6J4K2 584 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 PARM1Q6UWI2 310 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 OTOP3Q7RTS5 596 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 UBALD2Q8IYN6 164 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 KCTD17Q8N5Z5 321 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 GLIS3Q8NEA6 775 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 SLC7A14Q8TBB6 771 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 BORCS6Q96GS4 357 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 CCDC94Q9BW85 323 aaPredicted RBP8.56□□□□□ -1.04
PNKP-229ENST00000637897 PLA2G2FQ9BZM2 168 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 KCNH6Q9H252 994 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 FAM86C1Q9NVL1 165 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 KCND2Q9NZV8 630 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 ANKFY1Q9P2R3 1169 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 FBXL5Q9UKA1 691 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 CPSF3Q9UKF6 684 aaKnown RBP8.56□□□□□ -1.04
PNKP-229ENST00000637897 ODF2LQ9ULJ1 636 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms