RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 FLT3LGP49771 235 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 LACTBP83111 547 aaPredicted RBP23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 CDR2Q01850 454 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 PRKCZQ05513 592 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 ENOSF1Q7L5Y1 443 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 ADAMTS10Q9H324 1103 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 COG5Q9UP83 839 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 NCANO14594 1321 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 ATP8B3O60423 1300 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 FCGRTP55899 365 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 IRF5Q13568 498 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 DUOXA2Q1HG44 320 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 MEI1Q5TIA1 1274 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 DNAJB3Q8WWF6 145 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 RFFLQ8WZ73 363 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 MS4A14Q96JA4 679 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 ANK1P16157 1881 aa23.25■■□□□ 1.31
CHRNA7-228ENST00000637519 LACTBL1A8MY62 500 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 GPR32O75388 356 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 C6orf222P0C671 652 aaPredicted RBP23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 RHOXF2BP0C7M4 288 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 TMEM270Q6UE05 265 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 SCARA5Q6ZMJ2 495 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 RHOXF2Q9BQY4 288 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 ISCUQ9H1K1 167 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 PCDHB4Q9Y5E5 795 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 A0A0A6YYK5 440 aaPredicted RBP23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 ANKRD62A6NC57 917 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 HAS3O00219 553 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 ASS1P00966 412 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 MCF2P10911 925 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 AKR1A1P14550 325 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 C2orf54Q08AI8 447 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 RABGGTAQ92696 567 aa23.24■■□□□ 1.31
CHRNA7-228ENST00000637519 MBLAC1A4D2B0 266 aaPredicted RBP23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 CFHP08603 1231 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 JADE1Q6IE81 842 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 ZNF410Q86VK4 478 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 IMPG2Q9BZV3 1241 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 ANKZF1Q9H8Y5 726 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 B4GALT4O60513 344 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 BUB1BO60566 1050 aaPredicted RBP23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 PGK1P00558 417 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 KRT19P08727 400 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 CYBAP13498 195 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 TCP1P17987 556 aaKnown RBP23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 CD58P19256 250 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 GUCY2FP51841 1108 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 PURAQ00577 322 aaKnown RBP23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 DAAM2Q86T65 1068 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 CXCL16Q9H2A7 254 aa23.23■■□□□ 1.31
CHRNA7-228ENST00000637519 RTN2O75298 545 aa23.22■■□□□ 1.31
CHRNA7-228ENST00000637519 H2AFXP16104 143 aaPredicted RBP23.22■■□□□ 1.31
CHRNA7-228ENST00000637519 AP3M2P53677 418 aa23.22■■□□□ 1.31
CHRNA7-228ENST00000637519 ADAM17P78536 824 aa23.22■■□□□ 1.31
CHRNA7-228ENST00000637519 TRPC3Q13507 836 aa23.22■■□□□ 1.31
CHRNA7-228ENST00000637519 TMEM40Q8WWA1 233 aa23.22■■□□□ 1.31
CHRNA7-228ENST00000637519 PARD6BQ9BYG5 372 aa23.22■■□□□ 1.31
CHRNA7-228ENST00000637519 SIX4Q9UIU6 781 aa23.22■■□□□ 1.31
CHRNA7-228ENST00000637519 A0A1B0GUA9 196 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 CKAP4Q07065 602 aaKnown RBP23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 SURF1Q15526 300 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 IFI16Q16666 785 aaKnown RBP23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 SLC10A6Q3KNW5 377 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 PASD1Q8IV76 773 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 GPR161Q8N6U8 529 aaKnown RBP23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 RBBP8NLQ8NC74 664 aaPredicted RBP23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 ANKRD36BP1Q96IX9 119 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 HHIPL1Q96JK4 782 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 PNKPQ96T60 521 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 XYLT2Q9H1B5 865 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 SMIM35A0A1B0GVV1 85 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 TNNC2P02585 160 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 PRLRP16471 622 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 RNASE9P60153 205 aaKnown RBP23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 ZNF699Q32M78 642 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 ZNF394Q53GI3 561 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 C1orf127Q8N9H9 656 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 POLIQ9UNA4 740 aa23.21■■□□□ 1.31
CHRNA7-228ENST00000637519 NPTXRO95502 500 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 WEE2P0C1S8 567 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 TBXAS1P24557 533 aaPredicted RBP23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 HOXA11P31270 313 aaPredicted RBP23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 CLCN6P51797 869 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 C2CD6Q53TS8 623 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 CXCL17Q6UXB2 119 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 CATSPER4Q7RTX7 472 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 FAM81BQ96LP2 452 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 EIF2AQ9BY44 585 aaKnown RBP23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 GCOM2Q9BZD3 368 aaPredicted RBP23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 CTTNBP2NLQ9P2B4 639 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 Q9Y3F1 56 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 PCDHB2Q9Y5E7 798 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 TRIP12Q14669 1992 aaPredicted RBP23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 IL18RAPO95256 599 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 GNASQ5JWF2 1037 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 PEX26Q7Z412 305 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 CPA5Q8WXQ8 436 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 NIF3L1Q9GZT8 377 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 RNF19AQ9NV58 838 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms