RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 LRPAP1P30533 357 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 CTNNB1P35222 781 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 BMPR1AP36894 532 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 PBX3P40426 434 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 OR1G1P47890 313 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 ALDH7A1P49419 539 aaKnown RBP17.31■□□□□ 0.36
CLN6-216ENST00000636876 GUCY2FP51841 1108 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 CLDN10P78369 228 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 MYL5Q02045 173 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 C1orf220Q5T0J3 134 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 FRMD5Q7Z6J6 570 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 USP37Q86T82 979 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 IRF2BP1Q8IU81 584 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 OR5B17Q8NGF7 314 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 ANKRD36BP1Q96IX9 119 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 FAM84AQ96KN4 292 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 POP1Q99575 1024 aaKnown RBP17.31■□□□□ 0.36
CLN6-216ENST00000636876 PAAF1Q9BRP4 392 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 C17orf80Q9BSJ5 609 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 METTL14Q9HCE5 456 aaKnown RBP17.31■□□□□ 0.36
CLN6-216ENST00000636876 CACNG4Q9UBN1 327 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 NFE2L3Q9Y4A8 694 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 PCDHB12Q9Y5F1 795 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 A0A0C4DFX4 3053 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 NLRC5Q86WI3 1866 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 NRP1O14786 923 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 TNNC2P02585 160 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 ALDH2P05091 517 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 TRIM49P0CI25 452 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 TRIM49CP0CI26 452 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 RPL9P32969 192 aaKnown RBP17.3■□□□□ 0.36
CLN6-216ENST00000636876 ZNF165P49910 485 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 MARSP56192 900 aaKnown RBP17.3■□□□□ 0.36
CLN6-216ENST00000636876 DLG4P78352 724 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 LRSAM1Q6UWE0 723 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 TMEM130Q8N3G9 435 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 AOPEPQ8N6M6 819 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 C1orf127Q8N9H9 656 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 ZNF516Q92618 1163 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 RABGGTAQ92696 567 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 DDX27Q96GQ7 796 aaKnown RBP17.3■□□□□ 0.36
CLN6-216ENST00000636876 CNOT6LQ96LI5 555 aaKnown RBP17.3■□□□□ 0.36
CLN6-216ENST00000636876 MTMR12Q9C0I1 747 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 MTMR10Q9NXD2 777 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 DPP3Q9NY33 737 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 SPG21Q9NZD8 308 aa17.3■□□□□ 0.36
CLN6-216ENST00000636876 PRG3Q9Y2Y8 225 aaPredicted RBP17.3■□□□□ 0.36
CLN6-216ENST00000636876 TMEM265A0A087WTH1 108 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 NT5C1B-RDH14C9J2C7 533 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 DLL1O00548 723 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 PODXLO00592 558 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 IKBKBO14920 756 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 CAVIN2O95810 425 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 RB1P06400 928 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 PPM1AP35813 382 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 CLCNKBP51801 687 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 AP3M2P53677 418 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 ZNF445P59923 1031 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 UPP1Q16831 310 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 EPC2Q52LR7 807 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 FAM114A1Q8IWE2 563 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 TRIM59Q8IWR1 403 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 SLC39A11Q8N1S5 342 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 COLEC11Q9BWP8 271 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 PLVAPQ9BX97 442 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 SAMSN1Q9NSI8 373 aaKnown RBP17.29■□□□□ 0.36
CLN6-216ENST00000636876 ITGA11Q9UKX5 1188 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 MTUS1Q9ULD2 1270 aa17.29■□□□□ 0.36
CLN6-216ENST00000636876 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 ANO9A1A5B4 782 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 C5orf67F2Z3F1 127 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 F8W810 466 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 STX10O60499 249 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 NCAPHQ15003 741 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 DCAF17Q5H9S7 520 aaPredicted RBP17.28■□□□□ 0.36
CLN6-216ENST00000636876 TCERG1LQ5VWI1 586 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 C9orf57Q5W0N0 161 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 DCLRE1AQ6PJP8 1040 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 TRAPPC11Q7Z392 1133 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 TMEM173Q86WV6 379 aaPredicted RBP17.28■□□□□ 0.36
CLN6-216ENST00000636876 FBXO22Q8NEZ5 403 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 BCL7CQ8WUZ0 217 aaPredicted RBP17.28■□□□□ 0.36
CLN6-216ENST00000636876 IGSF21Q96ID5 467 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 TSPY26PQ9H489 355 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 MARCH5Q9NX47 278 aa17.28■□□□□ 0.36
CLN6-216ENST00000636876 SMTNL1A8MU46 457 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 TMEM189-UBE2V1I3L0A0 370 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 PPEF2O14830 753 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 KIF4AO95239 1232 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 C4BPAP04003 597 aaKnown RBP17.27■□□□□ 0.36
CLN6-216ENST00000636876 ITGB3P05106 788 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 GTF2H1P32780 548 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 PPP3CAQ08209 521 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 IQCB1Q15051 598 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 HSP90AA4PQ58FG1 418 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 CDKAL1Q5VV42 579 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 TDRD10Q5VZ19 366 aaKnown RBP17.27■□□□□ 0.36
CLN6-216ENST00000636876 DHX40Q8IX18 779 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms