RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 EEF1DP3Q658K8 133 aa13.81□□□□□ -0.2
CTSD-208ENST00000636843 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.81□□□□□ -0.2
CTSD-208ENST00000636843 GRASPQ7Z6J2 395 aaPredicted RBP13.81□□□□□ -0.2
CTSD-208ENST00000636843 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
CTSD-208ENST00000636843 SEMA4AQ9H3S1 761 aa13.81□□□□□ -0.2
CTSD-208ENST00000636843 CBX8Q9HC52 389 aa13.81□□□□□ -0.2
CTSD-208ENST00000636843 CDH7Q9ULB5 785 aa13.81□□□□□ -0.2
CTSD-208ENST00000636843 NOL7Q9UMY1 257 aaKnown RBP13.81□□□□□ -0.2
CTSD-208ENST00000636843 GDAQ9Y2T3 454 aa13.81□□□□□ -0.2
CTSD-208ENST00000636843 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
CTSD-208ENST00000636843 NUMBLQ9Y6R0 609 aa13.81□□□□□ -0.2
CTSD-208ENST00000636843 TMEM189-UBE2V1I3L0A0 370 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 BMP15O95972 392 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
CTSD-208ENST00000636843 C8AP07357 584 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 PFKFB1P16118 471 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 MSNP26038 577 aaKnown RBP13.8□□□□□ -0.2
CTSD-208ENST00000636843 MARCKSP29966 332 aaPredicted RBP13.8□□□□□ -0.2
CTSD-208ENST00000636843 CCT6AP40227 531 aaKnown RBP13.8□□□□□ -0.2
CTSD-208ENST00000636843 ZNF165P49910 485 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
CTSD-208ENST00000636843 RAB33AQ14088 237 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 TTC38Q5R3I4 469 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 RESP18Q5W5W9 173 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 DCLRE1AQ6PJP8 1040 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
CTSD-208ENST00000636843 SNX27Q96L92 541 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 UROC1Q96N76 676 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 ARHGEF3Q9NR81 526 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 HPSEQ9Y251 543 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 EDN1P05305 212 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 FGFR3P22607 806 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 SYKP43405 635 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 TOB1P50616 345 aaPredicted RBP13.8□□□□□ -0.2
CTSD-208ENST00000636843 FOXK2Q01167 660 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 PDIA5Q14554 519 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 ATF7IP2Q5U623 682 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 MTSS1LQ765P7 747 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 ADSSL1Q8N142 457 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 SHDQ96IW2 340 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 PPP1R10Q96QC0 940 aaKnown RBP13.8□□□□□ -0.2
CTSD-208ENST00000636843 DNAJC25Q9H1X3 360 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 CXCL16Q9H2A7 254 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 BHMT2Q9H2M3 363 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 USP20Q9Y2K6 914 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 SIT1Q9Y3P8 196 aa13.8□□□□□ -0.2
CTSD-208ENST00000636843 MYO15AQ9UKN7 3530 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 K7ERI5 159 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 CCL16O15467 120 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 ADAM12O43184 909 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 TRAPPC3O43617 180 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 B3GAT3O94766 335 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 OR1D2P34982 312 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 ZRSR1Q15695 479 aaKnown RBP13.79□□□□□ -0.2
CTSD-208ENST00000636843 ECM1Q16610 540 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 ELOA2Q8IYF1 753 aaPredicted RBP13.79□□□□□ -0.2
CTSD-208ENST00000636843 C4orf32Q8N8J7 132 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 FGF13Q92913 245 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 KIFC3Q9BVG8 833 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 NAT10Q9H0A0 1025 aaKnown RBP13.79□□□□□ -0.2
CTSD-208ENST00000636843 MTRRQ9UBK8 725 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 LRWD1Q9UFC0 647 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 POLIQ9UNA4 740 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 TNFSF13BQ9Y275 285 aa13.79□□□□□ -0.2
CTSD-208ENST00000636843 PHLPP2Q6ZVD8 1323 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 TPM3P06753 285 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 STARD6P59095 220 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 NTHL1P78549 312 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 UPP1Q16831 310 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 PARM1Q6UWI2 310 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 ANKS3Q6ZW76 656 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 LUZP1Q86V48 1076 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 CEP57L1Q8IYX8 460 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 SLC7A14Q8TBB6 771 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 FGF14Q92915 247 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 RAB34Q9BZG1 259 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 POLD4Q9HCU8 107 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
CTSD-208ENST00000636843 FAM13BQ9NYF5 915 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 DLGAP2Q9P1A6 1054 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 KCNH3Q9ULD8 1083 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 KIAA1024Q9UPX6 916 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 ZKSCAN5Q9Y2L8 839 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 BACE2Q9Y5Z0 518 aa13.78□□□□□ -0.2
CTSD-208ENST00000636843 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 GOLGA6L19H0YKK7 550 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 DCNP07585 359 aaKnown RBP13.77□□□□□ -0.21
CTSD-208ENST00000636843 GRM5P41594 1212 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 CLCNKBP51801 687 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 YARSP54577 528 aaKnown RBP13.77□□□□□ -0.21
CTSD-208ENST00000636843 GPC5P78333 572 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 DDX27Q96GQ7 796 aaKnown RBP13.77□□□□□ -0.21
CTSD-208ENST00000636843 ACO2Q99798 780 aaKnown RBP13.77□□□□□ -0.21
CTSD-208ENST00000636843 RPP25Q9BUL9 199 aaKnown RBP13.77□□□□□ -0.21
CTSD-208ENST00000636843 CCDC94Q9BW85 323 aaPredicted RBP13.77□□□□□ -0.21
CTSD-208ENST00000636843 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms