RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 SV2BQ7L1I2 683 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 GET4Q7L5D6 327 aaPredicted RBP20.66■□□□□ 0.9
CLN6-213ENST00000636212 HSCBQ8IWL3 235 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 C3orf58Q8NDZ4 430 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 APPL2Q8NEU8 664 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 NXPE3Q969Y0 559 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 C18orf25Q96B23 403 aaPredicted RBP20.66■□□□□ 0.9
CLN6-213ENST00000636212 KIF12Q96FN5 646 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 TSPAN18Q96SJ8 248 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 MSTO1Q9BUK6 570 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 KCNK12Q9HB15 430 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 POLIQ9UNA4 740 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 MTMR6Q9Y217 621 aa20.66■□□□□ 0.9
CLN6-213ENST00000636212 CITO14578 2027 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 OGTO15294 1046 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 PDIA4P13667 645 aaKnown RBP20.65■□□□□ 0.9
CLN6-213ENST00000636212 FSHRP23945 695 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 ELF1P32519 619 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 SLC39A14Q15043 492 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 DYMQ7RTS9 669 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 SLC7A14Q8TBB6 771 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 LRRC15Q8TF66 581 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 ZNF396Q96N95 335 aaPredicted RBP20.65■□□□□ 0.9
CLN6-213ENST00000636212 EPS15L1Q9UBC2 864 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 UBQLN1Q9UMX0 589 aaKnown RBP20.65■□□□□ 0.9
CLN6-213ENST00000636212 ZFP37Q9Y6Q3 630 aaPredicted RBP20.65■□□□□ 0.9
CLN6-213ENST00000636212 TECTAO75443 2155 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 TRIP11Q15643 1979 aa20.65■□□□□ 0.9
CLN6-213ENST00000636212 ADAM12O43184 909 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 NMT1P30419 496 aaKnown RBP20.64■□□□□ 0.89
CLN6-213ENST00000636212 GTF2BQ00403 316 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 STK38Q15208 465 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 VARS2Q5ST30 1063 aaKnown RBP20.64■□□□□ 0.89
CLN6-213ENST00000636212 SLFN12LQ6IEE8 588 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 CD300LGQ6UXG3 332 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 USP49Q70CQ1 688 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 GRASPQ7Z6J2 395 aaPredicted RBP20.64■□□□□ 0.89
CLN6-213ENST00000636212 MAP4K3Q8IVH8 894 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 CD302Q8IX05 232 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 SNX21Q969T3 373 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 CLIC6Q96NY7 704 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 USP28Q96RU2 1077 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 SEL1LQ9UBV2 794 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 FBXL21Q9UKT6 434 aa20.64■□□□□ 0.89
CLN6-213ENST00000636212 MORC2Q9Y6X9 1032 aaPredicted RBP20.64■□□□□ 0.89
CLN6-213ENST00000636212 TTC26A0AVF1 554 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 CCL16O15467 120 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 GAP43P17677 238 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 CYP3A5P20815 502 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 STAT6P42226 847 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 ZNF280DQ6N043 979 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 DDX12PQ92771 950 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 HVCN1Q96D96 273 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 FAM212AQ96EL1 285 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 SUSD3Q96L08 255 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 ST6GALNAC4Q9H4F1 302 aa20.63■□□□□ 0.89
CLN6-213ENST00000636212 A0A0B4J269 797 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 PRRG1O14668 218 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 N4BP1O75113 896 aaKnown RBP20.62■□□□□ 0.89
CLN6-213ENST00000636212 LRG1P02750 347 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 POU2F2P09086 479 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 LAMP2P13473 410 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 IGFBP6P24592 240 aaPredicted RBP20.62■□□□□ 0.89
CLN6-213ENST00000636212 AVPR2P30518 371 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 TNFSF9P41273 254 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 PTPN5P54829 565 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 ARPP19P56211 112 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 CTXN3Q4LDR2 81 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 SLC8B1Q6J4K2 584 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 BEST2Q8NFU1 509 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 ZNF461Q8TAF7 563 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 MYADMQ96S97 322 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 HAPLN2Q9GZV7 340 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 MRPL44Q9H9J2 332 aaKnown RBP20.62■□□□□ 0.89
CLN6-213ENST00000636212 TUBGCP4Q9UGJ1 667 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 DUSP12Q9UNI6 340 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 EXOC7Q9UPT5 735 aa20.62■□□□□ 0.89
CLN6-213ENST00000636212 VWA8A3KMH1 1905 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 LACTBL1A8MY62 500 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 LRPAP1P30533 357 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 NUBP1P53384 320 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 SPAG1Q07617 926 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 ZC2HC1CQ53FD0 456 aaPredicted RBP20.61■□□□□ 0.89
CLN6-213ENST00000636212 ADALQ6DHV7 355 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 RSPO2Q6UXX9 243 aaPredicted RBP20.61■□□□□ 0.89
CLN6-213ENST00000636212 SFR1Q86XK3 245 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 OXCT2Q9BYC2 517 aaPredicted RBP20.61■□□□□ 0.89
CLN6-213ENST00000636212 LRRC27Q9C0I9 530 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 IRF2BPLQ9H1B7 796 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 SMOC2Q9H3U7 446 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 PCDHB8Q9UN66 801 aa20.61■□□□□ 0.89
CLN6-213ENST00000636212 MEFVO15553 781 aaPredicted RBP20.6■□□□□ 0.89
CLN6-213ENST00000636212 IDEP14735 1019 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 PAX3P23760 479 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 NASPP49321 788 aaPredicted RBP20.6■□□□□ 0.89
CLN6-213ENST00000636212 ROR1Q01973 937 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 POSTNQ15063 836 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 ENOX2Q16206 610 aaKnown RBP20.6■□□□□ 0.89
CLN6-213ENST00000636212 TPGS2Q68CL5 300 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 DSTYKQ6XUX3 929 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms