RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 CYP11B2P19099 503 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 CD72P21854 359 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 NAMPTP43490 491 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 DNM1Q05193 864 aaKnown RBP17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 RAB33AQ14088 237 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 PABPC1LQ4VXU2 614 aaKnown RBP17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 IFT74Q96LB3 600 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 CLIC6Q96NY7 704 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 PNMA5Q96PV4 448 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 SPATA6Q9NWH7 488 aaPredicted RBP17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 MTF2Q9Y483 593 aaPredicted RBP17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 CDY1Q9Y6F8 540 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 CACNA1IQ9P0X4 2223 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 COL4A3Q01955 1670 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 FAM170BA6NMN3 283 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 I3L4J1 428 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 HOXA9P31269 272 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 CLCNKBP51801 687 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 NUCB2P80303 420 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 KARSQ15046 597 aaKnown RBP17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 PPP2R5AQ15172 486 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 MLF2Q15773 248 aaPredicted RBP17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 UVSSAQ2YD98 709 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 TMEM119Q4V9L6 283 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 KCNK18Q7Z418 384 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 DCLK2Q8N568 766 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 MCRS1Q96EZ8 462 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 BCO2Q9BYV7 579 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 CCSER1Q9C0I3 900 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 CCDC113Q9H0I3 377 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 GOLGA2P5Q9HBQ8 144 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 ZDHHC9Q9Y397 364 aa17.03■□□□□ 0.32
SNRNP48-203ENST00000634363 K7ERI5 159 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 PLCG1P19174 1290 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 FGFR3P22607 806 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 TKTP29401 623 aaKnown RBP17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 BRCC3P46736 316 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 OSTNP61366 133 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 KRT85P78386 507 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 DCAF4L1Q3SXM0 396 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 NT5DC1Q5TFE4 455 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 ATF7IP2Q5U623 682 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 RSPO2Q6UXX9 243 aaPredicted RBP17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 RMDN1Q96DB5 314 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 EPSTI1Q96J88 318 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 MTRRQ9UBK8 725 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 MRPS23Q9Y3D9 190 aaKnown RBP17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 NOTCH4Q99466 2003 aa17.02■□□□□ 0.32
SNRNP48-203ENST00000634363 VPS13AQ96RL7 3174 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 DMDP11532 3685 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 LAMTOR5O43504 91 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 TRAPPC3O43617 180 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 ME1P48163 572 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 ARPP19P56211 112 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 PFKPQ01813 784 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 PRKCQQ04759 706 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 CSTF1Q05048 431 aaKnown RBP17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 NPAS3Q8IXF0 933 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 RUBCNQ92622 972 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 KIFAP3Q92845 792 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 PPP1R10Q96QC0 940 aaKnown RBP17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 FANCMQ8IYD8 2048 aa17.01■□□□□ 0.31
SNRNP48-203ENST00000634363 CCDC169A6NNP5 214 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 KINO60870 393 aaKnown RBP17■□□□□ 0.31
SNRNP48-203ENST00000634363 CUTAO60888 179 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 ELF1P32519 619 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 EFNA5P52803 228 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 YARSP54577 528 aaKnown RBP17■□□□□ 0.31
SNRNP48-203ENST00000634363 UPP1Q16831 310 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 ANKS3Q6ZW76 656 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 USP49Q70CQ1 688 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 DGLUCYQ7Z3D6 616 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 MAML2Q8IZL2 1156 aaPredicted RBP17■□□□□ 0.31
SNRNP48-203ENST00000634363 SYT2Q8N9I0 419 aaPredicted RBP17■□□□□ 0.31
SNRNP48-203ENST00000634363 RUSC1Q9BVN2 902 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 TIPINQ9BVW5 301 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 PLA2G2FQ9BZM2 168 aa17■□□□□ 0.31
SNRNP48-203ENST00000634363 SMIM28A0A1B0GU29 152 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 TMEM189-UBE2V1I3L0A0 370 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 PRRG1O14668 218 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 LRG1P02750 347 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 RHOP08100 348 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 PTPN2P17706 415 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 SLC12A3P55017 1021 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 ZBTB41Q5SVQ8 909 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 RRAGBQ5VZM2 374 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 RINT1Q6NUQ1 792 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 CD300LGQ6UXG3 332 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 CCDC73Q6ZRK6 1079 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 TPRG1Q6ZUI0 275 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 CEP120Q8N960 986 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 C3orf58Q8NDZ4 430 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 ATRIPQ8WXE1 791 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 LARP4BQ92615 738 aaKnown RBP16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 RAD54LQ92698 747 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms