RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ANKRD36BP1Q96IX9 119 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 PAAF1Q9BRP4 392 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 CERS4Q9HA82 394 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 METTL14Q9HCE5 456 aaKnown RBP20.38■□□□□ 0.85
MECP2-216ENST00000627864 DPP3Q9NY33 737 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 PRG3Q9Y2Y8 225 aaPredicted RBP20.38■□□□□ 0.85
MECP2-216ENST00000627864 RWDD3Q9Y3V2 267 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 NFE2L3Q9Y4A8 694 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 GNA14O95837 355 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 TNNC2P02585 160 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 TRIM49P0CI25 452 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 TRIM49CP0CI26 452 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 ZNF165P49910 485 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 CLCNKBP51801 687 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 ERVK-21P61565 698 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 MYL5Q02045 173 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 DUOXA2Q1HG44 320 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 LRSAM1Q6UWE0 723 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 AOPEPQ8N6M6 819 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 ZNF516Q92618 1163 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 DDX27Q96GQ7 796 aaKnown RBP20.37■□□□□ 0.85
MECP2-216ENST00000627864 UROC1Q96N76 676 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 SAMD11Q96NU1 681 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 COLEC11Q9BWP8 271 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 MTMR12Q9C0I1 747 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 THAP9Q9H5L6 903 aa20.37■□□□□ 0.85
MECP2-216ENST00000627864 SAMSN1Q9NSI8 373 aaKnown RBP20.37■□□□□ 0.85
MECP2-216ENST00000627864 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.37■□□□□ 0.85
MECP2-216ENST00000627864 EPC2Q52LR7 807 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 HSP90AA4PQ58FG1 418 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 HABP4Q5JVS0 413 aaKnown RBP20.36■□□□□ 0.85
MECP2-216ENST00000627864 TCERG1LQ5VWI1 586 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 IRF2BP1Q8IU81 584 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 FAM114A1Q8IWE2 563 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 CNOT6LQ96LI5 555 aaKnown RBP20.36■□□□□ 0.85
MECP2-216ENST00000627864 BPIFA3Q9BQP9 254 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 TSPY26PQ9H489 355 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 MMRN2Q9H8L6 949 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 SPG21Q9NZD8 308 aa20.36■□□□□ 0.85
MECP2-216ENST00000627864 SMTNL1A8MU46 457 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 PODXLO00592 558 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 LRPAP1P30533 357 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 RPL9P32969 192 aaKnown RBP20.35■□□□□ 0.85
MECP2-216ENST00000627864 CLDN10P78369 228 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 ENPEPQ07075 957 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 UPP1Q16831 310 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 DCAF17Q5H9S7 520 aaPredicted RBP20.35■□□□□ 0.85
MECP2-216ENST00000627864 C1orf220Q5T0J3 134 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 DCLRE1AQ6PJP8 1040 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 SLC39A11Q8N1S5 342 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 LRCH3Q96II8 777 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 FANCLQ9NW38 375 aa20.35■□□□□ 0.85
MECP2-216ENST00000627864 MAGEC2Q9UBF1 373 aaPredicted RBP20.35■□□□□ 0.85
MECP2-216ENST00000627864 CARNS1A5YM72 827 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 F8W810 466 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 IKBKBO14920 756 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 PHACTR2O75167 634 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 ITGB3P05106 788 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 KRT19P08727 400 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 AP3M2P53677 418 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 MARSP56192 900 aaKnown RBP20.34■□□□□ 0.85
MECP2-216ENST00000627864 MCCD1P59942 119 aaPredicted RBP20.34■□□□□ 0.85
MECP2-216ENST00000627864 C9orf57Q5W0N0 161 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 TRAPPC11Q7Z392 1133 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 C1orf127Q8N9H9 656 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 KLHL23Q8NBE8 558 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 FBXO22Q8NEZ5 403 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 HASPINQ8TF76 798 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 ARNTL2Q8WYA1 636 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 PLVAPQ9BX97 442 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 ZNF576Q9H609 170 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 CBX8Q9HC52 389 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 AGAP1Q9UPQ3 857 aa20.34■□□□□ 0.85
MECP2-216ENST00000627864 VWA8A3KMH1 1905 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 BECN2A8MW95 431 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 PPEF2O14830 753 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 STX10O60499 249 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 TADA2AO75478 443 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 FGF18O76093 207 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 B3GAT3O94766 335 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 KIF4AO95239 1232 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 CAVIN2O95810 425 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 C4BPAP04003 597 aaKnown RBP20.33■□□□□ 0.85
MECP2-216ENST00000627864 RB1P06400 928 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 IGFBP6P24592 240 aaPredicted RBP20.33■□□□□ 0.85
MECP2-216ENST00000627864 POLR2BP30876 1174 aaKnown RBP20.33■□□□□ 0.85
MECP2-216ENST00000627864 PPM1AP35813 382 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 MTIF2P46199 727 aaKnown RBP20.33■□□□□ 0.85
MECP2-216ENST00000627864 GCLMP48507 274 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 ZNF445P59923 1031 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 PPP3CAQ08209 521 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 BIRC3Q13489 604 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 NCAPHQ15003 741 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 SCARA3Q6AZY7 606 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 TMEM173Q86WV6 379 aaPredicted RBP20.33■□□□□ 0.85
MECP2-216ENST00000627864 TRIM59Q8IWR1 403 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 DHX40Q8IX18 779 aaKnown RBP20.33■□□□□ 0.85
MECP2-216ENST00000627864 BCL7CQ8WUZ0 217 aaPredicted RBP20.33■□□□□ 0.85
MECP2-216ENST00000627864 TMEM169Q96HH4 297 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 IGSF21Q96ID5 467 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms