RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 UNC13DQ70J99 1090 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 TAS1R3Q7RTX0 852 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 MRPL10Q7Z7H8 261 aaKnown RBP7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 MAP4K3Q8IVH8 894 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 KLHL23Q8NBE8 558 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 CLP1Q92989 425 aaKnown RBP7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 P2RX5Q93086 422 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 PAGE5Q96GU1 130 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 C7orf25Q9BPX7 421 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 C1QTNF2Q9BXJ5 285 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 GOLPH3LQ9H4A5 285 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 TMEM206Q9H813 350 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 RC3H2Q9HBD1 1191 aaKnown RBP7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 ALG13Q9NP73 1137 aaKnown RBP7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 FAN1Q9Y2M0 1017 aa7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 PRG3Q9Y2Y8 225 aaPredicted RBP7.88□□□□□ -1.15
NPLOC4-221ENST00000625705 ZMYM2Q9UBW7 1377 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 PVALEFA0A1B0GWK0 134 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 CASTOR2A6NHX0 329 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 NT5C1B-RDH14C9J2C7 533 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 C5orf67F2Z3F1 127 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 OGTO15294 1046 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 GRM6O15303 877 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 XPOTO43592 962 aaKnown RBP7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 PRPF6O94906 941 aaKnown RBP7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 CLSTN1O94985 981 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 KIF20AO95235 890 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 SMC2O95347 1197 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 RPN1P04843 607 aaKnown RBP7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 ALDH2P05091 517 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 ITGB1P05556 798 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 CLTAP09496 248 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 CASP5P51878 434 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 GTF2BQ00403 316 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 SEZ6Q53EL9 994 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 C6orf118Q5T5N4 469 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 KIAA1841Q6NSI8 718 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 CNNM4Q6P4Q7 775 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 LRRC55Q6ZSA7 311 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 VASH1Q7L8A9 365 aaPredicted RBP7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 HS2ST1Q7LGA3 356 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 ZNF720Q7Z2F6 126 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 NELFCDQ8IXH7 590 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 CEP120Q8N960 986 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 POF1BQ8WVV4 589 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 HPS3Q969F9 1004 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 MRPL38Q96DV4 380 aaKnown RBP7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 ZBTB45Q96K62 511 aaPredicted RBP7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 COLEC11Q9BWP8 271 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 FAM117AQ9C073 453 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 LMAN2LQ9H0V9 348 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 ST6GALNAC4Q9H4F1 302 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 CWH43Q9H720 699 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 NRDE2Q9H7Z3 1164 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 RPF1Q9H9Y2 349 aaKnown RBP7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 SLC39A2Q9NP94 309 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 TLR9Q9NR96 1032 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 SLC38A7Q9NVC3 462 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 DNAJB4Q9UDY4 337 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 AGO2Q9UKV8 859 aaKnown RBP7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 PLAGL2Q9UPG8 496 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 HPSEQ9Y251 543 aa7.87□□□□□ -1.15
NPLOC4-221ENST00000625705 UBE4BO95155 1302 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 PLXNA4Q9HCM2 1894 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 FRMD3A2A2Y4 597 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 EIF3DO15371 548 aaKnown RBP eCLIP7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 PRPF40AO75400 957 aaKnown RBP7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 PIGRP01833 764 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 CXCL8P10145 99 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 FSHRP23945 695 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 GMPRP36959 345 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 SLC11A1P49279 550 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 ACOT2P49753 483 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 UBE2HP62256 183 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 UBE3AQ05086 875 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 MCL1Q07820 350 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 TUSC3Q13454 348 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 ADGRE1Q14246 886 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 HSP90AA2PQ14568 343 aaPredicted RBP7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 PLPP4Q5VZY2 271 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 TMC7Q7Z402 723 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 ZNF280BQ86YH2 543 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 SLC39A11Q8N1S5 342 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 HASPINQ8TF76 798 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 LRRN4Q8WUT4 740 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 SMARCE1Q969G3 411 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 SNX27Q96L92 541 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 TCF25Q9BQ70 676 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 FAM213AQ9BRX8 229 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 TMEM175Q9BSA9 504 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 RMND1Q9NWS8 449 aa7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 R3HCC1Q9Y3T6 440 aaKnown RBP7.86□□□□□ -1.15
NPLOC4-221ENST00000625705 SF3B1O75533 1304 aaKnown RBP eCLIP7.85□□□□□ -1.158e-6■■■■■ 107
NPLOC4-221ENST00000625705 A0A0B4J269 797 aa7.85□□□□□ -1.15
NPLOC4-221ENST00000625705 FAM237AA0A1B0GTK4 181 aa7.85□□□□□ -1.15
NPLOC4-221ENST00000625705 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.85□□□□□ -1.15
NPLOC4-221ENST00000625705 TISP43B9A030 160 aa7.85□□□□□ -1.15
NPLOC4-221ENST00000625705 ANKRD63C9JTQ0 380 aa7.85□□□□□ -1.15
NPLOC4-221ENST00000625705 H3BM21 787 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms