RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 DRC1Q96MC2 740 aa17.58■□□□□ 0.41
CD40-207ENST00000620709 PLEKHA4Q9H4M7 779 aa17.58■□□□□ 0.41
CD40-207ENST00000620709 KMT2EQ8IZD2 1858 aa17.58■□□□□ 0.4
CD40-207ENST00000620709 CLUHO75153 1309 aa17.58■□□□□ 0.4
CD40-207ENST00000620709 PHLPP2Q6ZVD8 1323 aa17.58■□□□□ 0.4
CD40-207ENST00000620709 SLC16A4O15374 487 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 SMC2O95347 1197 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 AFMP43652 599 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 GRAMD1CQ8IYS0 662 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 DAW1Q8N136 415 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 CEP120Q8N960 986 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 FAM200AQ8TCP9 573 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 SMARCE1Q969G3 411 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 ACO2Q99798 780 aaKnown RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 PRRX2Q99811 253 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 TARS2Q9BW92 718 aaKnown RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 MRPL4Q9BYD3 311 aaKnown RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 NT5C3AQ9H0P0 336 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 GOLGA2P5Q9HBQ8 144 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 WDR6Q9NNW5 1121 aaKnown RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 STK17AQ9UEE5 414 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 TNFSF13BQ9Y275 285 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 PCDHA5Q9Y5H7 936 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 B3GAT3O94766 335 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 PRR29P0C7W0 189 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 NLRP12P59046 1061 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 ELAVL2Q12926 359 aaKnown RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 TDGQ13569 410 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 NAB2Q15742 525 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 GET4Q7L5D6 327 aaPredicted RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 HDAC7Q8WUI4 952 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 ZNF707Q96C28 371 aaPredicted RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 DNAJC25Q9H1X3 360 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 CDT1Q9H211 546 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 KCNK12Q9HB15 430 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 FBXL21Q9UKT6 434 aa17.57■□□□□ 0.4
CD40-207ENST00000620709 MTCL1Q9Y4B5 1905 aaKnown RBP17.57■□□□□ 0.4
CD40-207ENST00000620709 TRIP11Q15643 1979 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 I3L4J1 428 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 MYL1P05976 194 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 IGFBP6P24592 240 aaPredicted RBP17.56■□□□□ 0.4
CD40-207ENST00000620709 MATR3P43243 847 aaKnown RBP eCLIP17.56■□□□□ 0.4
CD40-207ENST00000620709 CLCNKBP51801 687 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 STRN3Q13033 797 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 LIN9Q5TKA1 542 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 CYP26C1Q6V0L0 522 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 C1orf186Q6ZWK4 172 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 TRIML1Q8N9V2 468 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 FLCNQ8NFG4 579 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 LNX1Q8TBB1 728 aaPredicted RBP17.56■□□□□ 0.4
CD40-207ENST00000620709 RSAD2Q8WXG1 361 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 PNMA5Q96PV4 448 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 MYADMQ96S97 322 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 PHOX2BQ99453 314 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 PRKD2Q9BZL6 878 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 TMEM134Q9H6X4 195 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 TOPORSQ9NS56 1045 aaPredicted RBP17.56■□□□□ 0.4
CD40-207ENST00000620709 FAM86C1Q9NVL1 165 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 ZDHHC7Q9NXF8 308 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 POLIQ9UNA4 740 aa17.56■□□□□ 0.4
CD40-207ENST00000620709 PIEZO1Q92508 2521 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 BIN1O00499 593 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 N4BP1O75113 896 aaKnown RBP17.55■□□□□ 0.4
CD40-207ENST00000620709 GRM5P41594 1212 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 CACNB1Q02641 598 aaPredicted RBP17.55■□□□□ 0.4
CD40-207ENST00000620709 TCF15Q12870 199 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 DPYDQ12882 1025 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 UVSSAQ2YD98 709 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 TMEM119Q4V9L6 283 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 HYIQ5T013 277 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 LILRA6Q6PI73 481 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 DCLRE1AQ6PJP8 1040 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 TAS1R3Q7RTX0 852 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 GPR65Q8IYL9 337 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 ST13P5Q8NFI4 369 aaPredicted RBP17.55■□□□□ 0.4
CD40-207ENST00000620709 SPATA20Q8TB22 786 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 PIK3R5Q8WYR1 880 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 PPP1R10Q96QC0 940 aaKnown RBP17.55■□□□□ 0.4
CD40-207ENST00000620709 CLSTN3Q9BQT9 956 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 NAT10Q9H0A0 1025 aaKnown RBP17.55■□□□□ 0.4
CD40-207ENST00000620709 ANKFY1Q9P2R3 1169 aa17.55■□□□□ 0.4
CD40-207ENST00000620709 NPHP3-ACAD11A0A0J9YXS1 232 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 SMIM28A0A1B0GU29 152 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 STK25O00506 426 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 CCL16O15467 120 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 ADAM12O43184 909 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 NARSO43776 548 aaKnown RBP17.54■□□□□ 0.4
CD40-207ENST00000620709 ZMYND10O75800 440 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 PLA2G4BP0C869 781 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 ZNF165P49910 485 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 MAPK7Q13164 816 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 DHX8Q14562 1220 aaKnown RBP17.54■□□□□ 0.4
CD40-207ENST00000620709 PPM1LQ5SGD2 360 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 PDXDC1Q6P996 788 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
CD40-207ENST00000620709 C11orf57Q6ZUT1 292 aaPredicted RBP17.54■□□□□ 0.4
CD40-207ENST00000620709 ZBTB45Q96K62 511 aaPredicted RBP17.54■□□□□ 0.4
CD40-207ENST00000620709 UROC1Q96N76 676 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 ACAP3Q96P50 834 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms