RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FAM20AQ96MK3 541 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 PPP1R10Q96QC0 940 aaKnown RBP5.09□□□□□ -1.6
SNCA-213ENST00000618500 PPP1R16BQ96T49 567 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 GBP3Q9H0R5 595 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 ANKEF1Q9NU02 776 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 PRMT7Q9NVM4 692 aaPredicted RBP5.09□□□□□ -1.6
SNCA-213ENST00000618500 TBX20Q9UMR3 447 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 CCDC196A0A1B0GTZ2 297 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 DDX39AO00148 427 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 ERLIN2O94905 339 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 GCFC2P16383 781 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 CHMLP26374 656 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 QARSP47897 775 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 AFF1P51825 1210 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 EXOSC10Q01780 885 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 SLC14A1Q13336 389 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 RTN1Q16799 776 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 MTERF2Q49AM1 385 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 SYT13Q7L8C5 426 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 OTUD6AQ7L8S5 288 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 HAUS6Q7Z4H7 955 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 KBTBD6Q86V97 674 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 ELMOD1Q8N336 334 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 ACDQ96AP0 544 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 GAD1Q99259 594 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 EIF2AQ9BY44 585 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 IL25Q9H293 177 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 MINDY3Q9H8M7 445 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 KCNMB3Q9NPA1 279 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 KIAA1522Q9P206 1035 aaPredicted RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 AFF4Q9UHB7 1163 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 PRG3Q9Y2Y8 225 aaPredicted RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 INSL5Q9Y5Q6 135 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 BAZ2BQ9UIF8 2168 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 DOCK6Q96HP0 2047 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 BAHCC1Q9P281 2608 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 CEP192Q8TEP8 1941 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 PTGESO14684 152 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 APBB3O95704 486 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 LRG1P02750 347 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 P4HBP07237 508 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 DRD1P21728 446 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 RDXP35241 583 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 PTH1RQ03431 593 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 EMC2Q15006 297 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 EPHA7Q15375 998 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 SH3PXD2AQ5TCZ1 1133 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 PPP4R3AQ6IN85 833 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 SLC23A3Q6PIS1 610 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 PRSS55Q6UWB4 352 aaPredicted RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 SYNE3Q6ZMZ3 975 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 PDZD4Q76G19 769 aaPredicted RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 SCUBE3Q8IX30 993 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 ADAM32Q8TC27 787 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 PRPF31Q8WWY3 499 aaKnown RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 MTRQ99707 1265 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 RNF26Q9BY78 433 aaPredicted RBP5.08□□□□□ -1.6
SNCA-213ENST00000618500 CCDC113Q9H0I3 377 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 C2orf40Q9H1Z8 148 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 NCANO14594 1321 aa5.08□□□□□ -1.6
SNCA-213ENST00000618500 CDX4O14627 284 aaPredicted RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 TNFRSF10BO14763 440 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 PFKLP17858 780 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 GDI1P31150 447 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 RPL9P32969 192 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 MCM2P49736 904 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 AMPD2Q01433 879 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 NFXL1Q6ZNB6 911 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 CEP76Q8TAP6 659 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 ADAMTS14Q8WXS8 1223 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 WBP1Q96G27 269 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 DUSP9Q99956 384 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 MFRPQ9BY79 579 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 RWDD1Q9H446 243 aaPredicted RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 FZD8Q9H461 694 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 NXF3Q9H4D5 531 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 DNAAF2Q9NVR5 837 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 CACNA1BQ00975 2339 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 PLXNB3Q9ULL4 1909 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 A0A087WV48 116 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 CCDC194A0A1B0GVG4 234 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 HEPACAM2A8MVW5 462 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 KHNYNO15037 678 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 ATXN7O15265 892 aaPredicted RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 CAVIN2O95810 425 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 THP07101 528 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 KCNE1P15382 129 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 ARF4P18085 180 aaPredicted RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 MUTP22033 750 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 EVCP57679 992 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 FOXC1Q12948 553 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 MYBPC2Q14324 1141 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 UPP1Q16831 310 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 PRR16Q569H4 304 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 CYP4A22Q5TCH4 519 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 FAM171A1Q5VUB5 890 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 ALKAL1Q6UXT8 129 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 KCNB2Q92953 911 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 CCDC136Q96JN2 1154 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 NLRP4Q96MN2 994 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms