RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 MTMR12Q9C0I1 747 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 DPP3Q9NY33 737 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.53■■□□□ 1.52
CBWD3-213ENST00000618217 SMTNL1A8MU46 457 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 GALTP07902 379 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 LRPAP1P30533 357 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 C15orf39Q6ZRI6 1047 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 USP37Q86T82 979 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 LUZP1Q86V48 1076 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 FAM114A1Q8IWE2 563 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 C1orf127Q8N9H9 656 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 BEST2Q8NFU1 509 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 CACTINQ8WUQ7 758 aaKnown RBP24.52■■□□□ 1.52
CBWD3-213ENST00000618217 FAM193BQ96PV7 902 aaPredicted RBP24.52■■□□□ 1.52
CBWD3-213ENST00000618217 TMEM175Q9BSA9 504 aa24.52■■□□□ 1.52
CBWD3-213ENST00000618217 SCN1AP35498 2009 aa24.51■■□□□ 1.51
CBWD3-213ENST00000618217 CASTOR2A6NHX0 329 aa24.51■■□□□ 1.51
CBWD3-213ENST00000618217 TULP1O00294 542 aaPredicted RBP24.51■■□□□ 1.51
CBWD3-213ENST00000618217 XPOTO43592 962 aaKnown RBP24.51■■□□□ 1.51
CBWD3-213ENST00000618217 ZC3H11AO75152 810 aaKnown RBP eCLIP24.51■■□□□ 1.51
CBWD3-213ENST00000618217 SLC11A1P49279 550 aa24.51■■□□□ 1.51
CBWD3-213ENST00000618217 BCAR1P56945 870 aa24.51■■□□□ 1.51
CBWD3-213ENST00000618217 TAP1Q03518 808 aa24.51■■□□□ 1.51
CBWD3-213ENST00000618217 UPP1Q16831 310 aa24.51■■□□□ 1.51
CBWD3-213ENST00000618217 MSRAQ9UJ68 235 aa24.51■■□□□ 1.51
CBWD3-213ENST00000618217 CHD7Q9P2D1 2997 aa24.51■■□□□ 1.51
CBWD3-213ENST00000618217 ANO9A1A5B4 782 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 KCNJ18B7U540 433 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 C4BPAP04003 597 aaKnown RBP24.5■■□□□ 1.51
CBWD3-213ENST00000618217 IGFBP6P24592 240 aaPredicted RBP24.5■■□□□ 1.51
CBWD3-213ENST00000618217 DNAJB2P25686 324 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 RPL9P32969 192 aaKnown RBP24.5■■□□□ 1.51
CBWD3-213ENST00000618217 AP3M2P53677 418 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 KCNJ12Q14500 433 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 TCP11X2Q5H9J9 407 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 KCNT2Q6UVM3 1135 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 SPRED2Q7Z698 418 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 COLGALT1Q8NBJ5 622 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 UROC1Q96N76 676 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 NKX2-4Q9H2Z4 354 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 SIX4Q9UIU6 781 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 ALDH2P05091 517 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 TMEM191BP0C7N4 346 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 LAG3P18627 525 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 EEF1GP26641 437 aaKnown RBP24.5■■□□□ 1.51
CBWD3-213ENST00000618217 GTF2H1P32780 548 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 PBX3P40426 434 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 CLCNKBP51801 687 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 ZACNQ401N2 412 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 CD300LGQ6UXG3 332 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 SV2AQ7L0J3 742 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 TRAPPC11Q7Z392 1133 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 RABGGTAQ92696 567 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 DDX27Q96GQ7 796 aaKnown RBP24.5■■□□□ 1.51
CBWD3-213ENST00000618217 ANKRD36BP1Q96IX9 119 aa24.5■■□□□ 1.51
CBWD3-213ENST00000618217 F8W810 466 aa24.49■■□□□ 1.51
CBWD3-213ENST00000618217 PIRO00625 290 aa24.49■■□□□ 1.51
CBWD3-213ENST00000618217 NRP1O14786 923 aa24.49■■□□□ 1.51
CBWD3-213ENST00000618217 TNNC2P02585 160 aa24.49■■□□□ 1.51
CBWD3-213ENST00000618217 GCLMP48507 274 aa24.49■■□□□ 1.51
CBWD3-213ENST00000618217 ALDH7A1P49419 539 aaKnown RBP24.49■■□□□ 1.51
CBWD3-213ENST00000618217 DCAF17Q5H9S7 520 aaPredicted RBP24.49■■□□□ 1.51
CBWD3-213ENST00000618217 TDRD10Q5VZ19 366 aaKnown RBP24.49■■□□□ 1.51
CBWD3-213ENST00000618217 C9orf57Q5W0N0 161 aa24.49■■□□□ 1.51
CBWD3-213ENST00000618217 ITGA11Q9UKX5 1188 aa24.49■■□□□ 1.51
CBWD3-213ENST00000618217 BECN2A8MW95 431 aa24.48■■□□□ 1.51
CBWD3-213ENST00000618217 PPEF2O14830 753 aa24.48■■□□□ 1.51
CBWD3-213ENST00000618217 BMPR1AP36894 532 aa24.48■■□□□ 1.51
CBWD3-213ENST00000618217 SPOUT1Q5T280 376 aaKnown RBP24.48■■□□□ 1.51
CBWD3-213ENST00000618217 TCERG1LQ5VWI1 586 aa24.48■■□□□ 1.51
CBWD3-213ENST00000618217 TMEM173Q86WV6 379 aaPredicted RBP24.48■■□□□ 1.51
CBWD3-213ENST00000618217 C3orf58Q8NDZ4 430 aa24.48■■□□□ 1.51
CBWD3-213ENST00000618217 ZNF558Q96NG5 402 aa24.48■■□□□ 1.51
CBWD3-213ENST00000618217 MAGEC2Q9UBF1 373 aaPredicted RBP24.48■■□□□ 1.51
CBWD3-213ENST00000618217 FAN1Q9Y2M0 1017 aa24.48■■□□□ 1.51
CBWD3-213ENST00000618217 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.48■■□□□ 1.51
CBWD3-213ENST00000618217 NT5C1B-RDH14C9J2C7 533 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 STX10O60499 249 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 VNN1O95497 513 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 OR1G1P47890 313 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 ERVK-21P61565 698 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 DCLRE1AQ6PJP8 1040 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 GAS2L3Q86XJ1 694 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 CREBRFQ8IUR6 639 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 SLC39A11Q8N1S5 342 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 BCL7CQ8WUZ0 217 aaPredicted RBP24.47■■□□□ 1.51
CBWD3-213ENST00000618217 TUBGCP2Q9BSJ2 902 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 C17orf80Q9BSJ5 609 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 TMEM8AQ9HCN3 771 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 AAASQ9NRG9 546 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 MARCH5Q9NX47 278 aa24.47■■□□□ 1.51
CBWD3-213ENST00000618217 LRRC10BA6NIK2 292 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 TMEM189-UBE2V1I3L0A0 370 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 PODXLO00592 558 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 EFEMP2O95967 443 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 CST3P01034 146 aaPredicted RBP24.46■■□□□ 1.51
CBWD3-213ENST00000618217 ITGB3P05106 788 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 ITGB1P05556 798 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 ATP1A3P13637 1013 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 MTIF2P46199 727 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms