RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 TMEM179Q6ZVK1 233 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 MIGA2Q7L4E1 593 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 HORMAD1Q86X24 394 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 SIX6OS1Q8N1H7 587 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 TNIP2Q8NFZ5 429 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 CASP10Q92851 521 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 NR1H4Q96RI1 486 aaPredicted RBP10.8□□□□□ -0.68
CUL4A-212ENST00000617546 DMAP1Q9NPF5 467 aaPredicted RBP10.8□□□□□ -0.68
CUL4A-212ENST00000617546 SALL1Q9NSC2 1324 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 DYTNA2CJ06 578 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 DCAF8L1A6NGE4 600 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 CLASP2O75122 1294 aaKnown RBP10.8□□□□□ -0.68
CUL4A-212ENST00000617546 THRAP10827 490 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 MUTP22033 750 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 HMOX2P30519 316 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 KRT76Q01546 638 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 UGP2Q16851 508 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 EAPPQ56P03 285 aaPredicted RBP10.8□□□□□ -0.68
CUL4A-212ENST00000617546 ZNF667Q5HYK9 610 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 HEATR6Q6AI08 1181 aaKnown RBP10.8□□□□□ -0.68
CUL4A-212ENST00000617546 PI4KBQ9UBF8 816 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 HEY2Q9UBP5 337 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 COL3A1P02461 1466 aaPredicted RBP10.8□□□□□ -0.68
CUL4A-212ENST00000617546 CYP2D7A0A087X1C5 515 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 SMIM31A0A1B0GVY4 71 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 ZNF839A8K0R7 811 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 F8W8V4 182 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 E2F6O75461 281 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 GZMAP12544 262 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 TRIM16LQ309B1 348 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 CENPPQ6IPU0 288 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 GPD1LQ8N335 351 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 ATP6V1E2Q96A05 226 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 LACRTQ9GZZ8 138 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 GTSE1Q9NYZ3 720 aa10.8□□□□□ -0.68
CUL4A-212ENST00000617546 ATP8B3O60423 1300 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 KANSL1LA0AUZ9 987 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 TBC1D4O60343 1298 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 SRP72O76094 671 aaKnown RBP10.79□□□□□ -0.68
CUL4A-212ENST00000617546 CCDC159P0C7I6 412 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 KCNQ4P56696 695 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 EIF3EP60228 445 aaKnown RBP10.79□□□□□ -0.68
CUL4A-212ENST00000617546 TNFAIP2Q03169 654 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 DLGAP5Q15398 846 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 TTMPQ5BVD1 217 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 ARMCX2Q7L311 632 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 CCNJLQ8IV13 435 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 C4orf33Q8N1A6 199 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 JDP2Q8WYK2 163 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 DYNLL2Q96FJ2 89 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 SLC13A1Q9BZW2 595 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 PARVBQ9HBI1 364 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 BTBD7Q9P203 1132 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 G3BP2Q9UN86 482 aaKnown RBP10.79□□□□□ -0.68
CUL4A-212ENST00000617546 ARHGEF37A1IGU5 675 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 BBOX1O75936 387 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 TNFAIP8O95379 198 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 EIF2S1P05198 315 aaKnown RBP10.79□□□□□ -0.68
CUL4A-212ENST00000617546 PSMC3P17980 439 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 S100A5P33763 92 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 BCAR1P56945 870 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 DNAJC3Q13217 504 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 ZFP1Q6P2D0 407 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 TRPC4APQ8TEL6 797 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 STARD13Q9Y3M8 1113 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 APOL1O14791 398 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 XIAPP98170 497 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 KYAT1Q16773 422 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 EFHC1Q5JVL4 640 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 ERMARDQ5T6L9 678 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 SNX30Q5VWJ9 437 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 EPS8L3Q8TE67 593 aaKnown RBP10.79□□□□□ -0.68
CUL4A-212ENST00000617546 FAR2Q96K12 515 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 BEGAINQ9BUH8 593 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 SORCS3Q9UPU3 1222 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 CDYLQ9Y232 598 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 RFX5P48382 616 aaPredicted RBP10.79□□□□□ -0.68
CUL4A-212ENST00000617546 PEX3P56589 373 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 TCP10Q12799 353 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 TAF12Q16514 161 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 LRRC74BQ6ZQY2 392 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 FRA10AC1Q70Z53 315 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 C9orf72Q96LT7 481 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 CHMP2BQ9UQN3 213 aa10.79□□□□□ -0.68
CUL4A-212ENST00000617546 OVOS2A0A0J9YW53 1432 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 OVOS2Q6IE36 1432 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 PTPRMP28827 1452 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 A0A1B0GW55 424 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 RIPK2O43353 540 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 DUX4L2P0CJ85 424 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 DUX4L3P0CJ86 424 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 DUX4L4P0CJ87 422 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 DUX4L5P0CJ88 424 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 DUX4L6P0CJ89 424 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 DUX4L7P0CJ90 424 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 LLGL1Q15334 1064 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 STILQ15468 1287 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 USP49Q70CQ1 688 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 ASPSCR1Q9BZE9 553 aa10.78□□□□□ -0.68
CUL4A-212ENST00000617546 RHBDL2Q9NX52 303 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms