RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 KAZNQ674X7 775 aa15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 TLDC1Q6P9B6 456 aa15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 RUFY4Q6ZNE9 571 aa15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 CD302Q8IX05 232 aa15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 KIF2BQ8N4N8 673 aa15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 PRPF31Q8WWY3 499 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 UPF1Q92900 1129 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 MRRFQ96E11 262 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 INPP4AQ96PE3 977 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 APOL6Q9BWW8 343 aa15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 FAM49AQ9H0Q0 323 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 ERVK-5Q9HDB9 667 aa15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 ADARB2Q9NS39 739 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-208ENST00000617339 SLCO1A2P46721 670 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 GTF2BQ00403 316 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 FAM47CQ5HY64 1035 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 NT5DC3Q86UY8 548 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 GPC2Q8N158 579 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 C18orf8Q96DM3 657 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 ADAM33Q9BZ11 813 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 TXNRD2Q9NNW7 524 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 UMODL1Q5DID0 1318 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 MFAP3P55082 362 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 EGFL6Q8IUX8 553 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 RFFLQ8WZ73 363 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 LRRC45Q96CN5 670 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 MKNK1Q9BUB5 465 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 C1orf112Q9NSG2 853 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 RTN2O75298 545 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 ATP4AP20648 1035 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 PPATQ06203 517 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 HP1BP3Q5SSJ5 553 aaPredicted RBP15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 PRUNE1Q86TP1 453 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 CCDC105Q8IYK2 499 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 RPTORQ8N122 1335 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 ARMC2Q8NEN0 867 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 OR5B17Q8NGF7 314 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 NEK9Q8TD19 979 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 MGARPQ8TDB4 240 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 ATG4AQ8WYN0 398 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 CCT6BQ92526 530 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 ANAPC7Q9UJX3 599 aa15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 ABT1Q9ULW3 272 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-208ENST00000617339 CCT8L1PA6NM43 557 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 PLA2G6O60733 806 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 UBA1P22314 1058 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 CLCN3P51790 818 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 GPD1LQ8N335 351 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 LMO3Q8TAP4 145 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 DBR1Q9UK59 544 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 A8MUI8 341 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 DGAT1O75907 488 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 CD19P15391 556 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 CYP11B1P15538 503 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 DRD4P21917 467 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 XRCC4Q13426 336 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 TRIM68Q6AZZ1 485 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 AGAP11Q8TF27 550 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 ZNF516Q92618 1163 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 HAUS1Q96CS2 278 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 CHMP6Q96FZ7 201 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.062e-6■■■□□ 16.1
SHROOM1-208ENST00000617339 TSKSQ9UJT2 592 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 AFG3L2Q9Y4W6 797 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 PI4K2BG5E9Z4 385 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 OSBPP22059 807 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 GPC5P78333 572 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 ZC3H3Q8IXZ2 948 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 MREGQ8N565 214 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 LRRC57Q8N9N7 239 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 EPS8L1Q8TE68 723 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 OPTNQ96CV9 577 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 KCND2Q9NZV8 630 aa15.42■□□□□ 0.06
SHROOM1-208ENST00000617339 PTPRJQ12913 1337 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 MGRN1O60291 552 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 AP1G2O75843 785 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 CELF2O95319 508 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 ARIH2O95376 493 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 PSMC4P43686 418 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 KCNJ2P63252 427 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 BRDTQ58F21 947 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 CAPN12Q6ZSI9 719 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 ANKS4BQ8N8V4 417 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 SPATC1LQ9H0A9 340 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 ASCC2Q9H1I8 757 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 AKT3Q9Y243 479 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 SNCAIPQ9Y6H5 919 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 C19orf81C9J6K1 198 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 O00370 1275 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 CLDN3O15551 220 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 CAND2O75155 1236 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 SUPT20HL2P0C7V6 817 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 CHN1P15882 459 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 GLRA2P23416 452 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 PRKCIP41743 596 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 XKR3Q5GH77 459 aa15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 ZNF564Q8TBZ8 553 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-208ENST00000617339 KIFAP3Q92845 792 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms