RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SNX12Q9UMY4 172 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 MGAMO43451 1857 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 NFICP08651 508 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 STAG3L1P0CL83 205 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CLDN10P78369 228 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 FMO1Q01740 532 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 PRKCZQ05513 592 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 RSRC2Q7L4I2 434 aaKnown RBP8.37□□□□□ -1.07
NEK3-207ENST00000617054 DAAM2Q86T65 1068 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CREG2Q8IUH2 290 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 TMEM40Q8WWA1 233 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 TRIB2Q92519 343 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 PNKPQ96T60 521 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 PARD6BQ9BYG5 372 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 KIAA1586Q9HCI6 787 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 LOC102724159A0A0B4J2E5 919 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CTAGE15A4D2H0 777 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 TMEM88BA6NKF7 163 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 LACTBL1A8MY62 500 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CTAGE8P0CG41 777 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 RGS2P41220 211 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 PHKA2P46019 1235 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 RAP1GAPP47736 663 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CDH8P55286 799 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 NOP14P78316 857 aaKnown RBP8.37□□□□□ -1.07
NEK3-207ENST00000617054 CAMK2BQ13554 666 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 PWP2Q15269 919 aaKnown RBP8.37□□□□□ -1.07
NEK3-207ENST00000617054 CXCL17Q6UXB2 119 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CTAGE6Q86UF2 777 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 BRSK2Q8IWQ3 736 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CTAGE4Q8IX94 777 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 LINC01465Q8N7H1 131 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CGRRF1Q99675 332 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 JPH2Q9BR39 696 aaPredicted RBP8.37□□□□□ -1.07
NEK3-207ENST00000617054 APOL6Q9BWW8 343 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 PDZD7Q9H5P4 517 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 NENFQ9UMX5 172 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 PCDHB4Q9Y5E5 795 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 GAS2O43903 313 aaKnown RBP8.37□□□□□ -1.07
NEK3-207ENST00000617054 HOXC6P09630 235 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 CYP2C9P11712 490 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 PROZP22891 400 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 MFSD10Q14728 455 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 GNASQ5JWF2 1037 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 DAB2IPQ5VWQ8 1189 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 TPCN2Q8NHX9 752 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 GOLGA1Q92805 767 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 MAP7D2Q96T17 732 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 EIF2AQ9BY44 585 aaKnown RBP8.37□□□□□ -1.07
NEK3-207ENST00000617054 C2orf40Q9H1Z8 148 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 ANKZF1Q9H8Y5 726 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
NEK3-207ENST00000617054 POLIQ9UNA4 740 aa8.37□□□□□ -1.07
NEK3-207ENST00000617054 KCNK3O14649 394 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 MAGEB2O15479 319 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 BUB1BO60566 1050 aaPredicted RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 TRPA1O75762 1119 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 ERLIN2O94905 339 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 TMEM191BP0C7N4 346 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 GTF2H1P32780 548 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 ABL2P42684 1182 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 CLCN6P51797 869 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 SLC7A5Q01650 507 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 TAGLNQ01995 201 aaKnown RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 GLRA4Q5JXX5 417 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 JADE1Q6IE81 842 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 ADAT2Q7Z6V5 191 aaKnown RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 CEP112Q8N8E3 955 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 HDAC7Q8WUI4 952 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 CTNNBL1Q8WYA6 563 aaPredicted RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 DDX1Q92499 740 aaKnown RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 GLMNQ92990 594 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 CYFIP2Q96F07 1278 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 GDAP1L1Q96MZ0 367 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 TRIM7Q9C029 511 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 ZNF446Q9NWS9 450 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 MAP3K13O43283 966 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 CA12O43570 354 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 TSPAN1O60635 241 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 GJB6O95452 261 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 MYCP01106 439 aaPredicted RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 AKAP5P24588 427 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 PDE6CP51160 858 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 CUL2Q13617 745 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 FSCN1Q16658 493 aaKnown RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 DUOXA2Q1HG44 320 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 AADACL2Q6P093 401 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 EXOC8Q8IYI6 725 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 RNF10Q8N5U6 811 aaKnown RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 AP5M1Q9H0R1 490 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 PDCL3Q9H2J4 239 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 RPF1Q9H9Y2 349 aaKnown RBP8.36□□□□□ -1.07
NEK3-207ENST00000617054 CTTNBP2NLQ9P2B4 639 aa8.36□□□□□ -1.07
NEK3-207ENST00000617054 PMM2O15305 246 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ASAP2O43150 1006 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 GPR32O75388 356 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 F2P00734 622 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ITGB3P05106 788 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 CCDC172P0C7W6 258 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ACO1P21399 889 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms