RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 PCDHA3Q9Y5H8 950 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 RBM47A0AV96 593 aaKnown RBP16.82■□□□□ 0.28
NR1H3-235ENST00000616973 TMEM110-MUSTN1A8MSY1 372 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ACKR2O00590 384 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 CYP2C8P10632 490 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ECHS1P30084 290 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 GYS2P54840 703 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 POU5F1BQ06416 359 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ARHGAP1Q07960 439 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ZNF484Q5JVG2 852 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 MPZL3Q6UWV2 235 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ZNF467Q7Z7K2 595 aaPredicted RBP16.82■□□□□ 0.28
NR1H3-235ENST00000616973 KRT35Q92764 455 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 TCHPQ9BT92 498 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 IMPG2Q9BZV3 1241 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ERAP1Q9NZ08 941 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 AMACRQ9UHK6 382 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 NUB1Q9Y5A7 615 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 PCDHB4Q9Y5E5 795 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 FAM170AA1A519 330 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ASS1P00966 412 aaKnown RBP16.82■□□□□ 0.28
NR1H3-235ENST00000616973 CETPP11597 493 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 HARSP12081 509 aaKnown RBP16.82■□□□□ 0.28
NR1H3-235ENST00000616973 HSPA9P38646 679 aaKnown RBP16.82■□□□□ 0.28
NR1H3-235ENST00000616973 TNFSF9P41273 254 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ZNF211Q13398 564 aaPredicted RBP16.82■□□□□ 0.28
NR1H3-235ENST00000616973 TRADDQ15628 312 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 SEL1L2Q5TEA6 688 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 ZBTB33Q86T24 672 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 RHPN2Q8IUC4 686 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 IQCKQ8N0W5 287 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 VCPIP1Q96JH7 1222 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 PLEKHA4Q9H4M7 779 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 FAM114A2Q9NRY5 505 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 NR2E1Q9Y466 385 aa16.82■□□□□ 0.28
NR1H3-235ENST00000616973 FAM187AA6NFU0 413 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 GOLGA8KD6RF30 607 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 STRNO43815 780 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 DHX34Q14147 1143 aaKnown RBP16.81■□□□□ 0.28
NR1H3-235ENST00000616973 SEZ6Q53EL9 994 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 EFCAB12Q6NXP0 572 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 TAPT1Q6NXT6 567 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 EMID1Q96A84 441 aaPredicted RBP16.81■□□□□ 0.28
NR1H3-235ENST00000616973 MS4A4AQ96JQ5 239 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 MORF4L1Q9UBU8 362 aa16.81■□□□□ 0.28
NR1H3-235ENST00000616973 CHORDC1Q9UHD1 332 aaPredicted RBP16.81■□□□□ 0.28
NR1H3-235ENST00000616973 TTI1O43156 1089 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 SPOPO43791 374 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 C22orf31O95567 290 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 GH1P01241 217 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 CALCAP01258 141 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 GNA15P30679 374 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 NSFP46459 744 aaKnown RBP16.8■□□□□ 0.28
NR1H3-235ENST00000616973 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-235ENST00000616973 MARCKSL1P49006 195 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 ZNF132P52740 706 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 TMEM63BQ5T3F8 832 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 ATF7IP2Q5U623 682 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 TMEM270Q6UE05 265 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 MON1BQ7L1V2 547 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 CD302Q8IX05 232 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 EFCAB13Q8IY85 973 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 GOLGA6L1Q8N7Z2 621 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 RBBP8NLQ8NC74 664 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-235ENST00000616973 TRAPPC12Q8WVT3 735 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 RIN2Q8WYP3 895 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-235ENST00000616973 FAM204AQ9H8W3 233 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 UTP11Q9Y3A2 253 aaKnown RBP16.8■□□□□ 0.28
NR1H3-235ENST00000616973 COL1A2P08123 1366 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 PDHXO00330 501 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 PHF2O75151 1096 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 MAPK4P31152 587 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 SLC1A1P43005 524 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 GTF2A2P52657 109 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 NOMO3P69849 1222 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 MBTD1Q05BQ5 628 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 HLTFQ14527 1009 aaKnown RBP eCLIP16.8■□□□□ 0.28
NR1H3-235ENST00000616973 DUOXA2Q1HG44 320 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 SGSM1Q2NKQ1 1148 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 CFAP58Q5T655 872 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 NAA35Q5VZE5 725 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 MAMDC4Q6UXC1 1216 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 PHF13Q86YI8 300 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-235ENST00000616973 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-235ENST00000616973 CYFIP2Q96F07 1278 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 BTBD6Q96KE9 485 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 RUFY1Q96T51 708 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 RNPEPQ9H4A4 650 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 ERVK-5Q9HDB9 667 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 TNFSF13BQ9Y275 285 aa16.8■□□□□ 0.28
NR1H3-235ENST00000616973 UMODL1Q5DID0 1318 aa16.79■□□□□ 0.28
NR1H3-235ENST00000616973 MAGEB2O15479 319 aa16.79■□□□□ 0.28
NR1H3-235ENST00000616973 B4GALT4O60513 344 aa16.79■□□□□ 0.28
NR1H3-235ENST00000616973 CST3P01034 146 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-235ENST00000616973 LGALS2P05162 132 aa16.79■□□□□ 0.28
NR1H3-235ENST00000616973 ADORA2AP29274 412 aa16.79■□□□□ 0.28
NR1H3-235ENST00000616973 CHRNA3P32297 505 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms