RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PACS2Q86VP3 889 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 SAMD3Q8N6K7 520 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 EPS8L3Q8TE67 593 aaKnown RBP14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 CCDC114Q96M63 670 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 ZNF302Q9NR11 478 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 CHST7Q9NS84 486 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 KLHL11Q9NVR0 708 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 FBXO40Q9UH90 709 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 ASIC3Q9UHC3 531 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 A6NNZ2 444 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 ATP2C2O75185 946 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 NSFP46459 744 aaKnown RBP14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 IFI35P80217 286 aaPredicted RBP14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 TUBB8Q3ZCM7 444 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 APBB1IPQ7Z5R6 666 aaPredicted RBP14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 TRPM4Q8TD43 1214 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 FBXL18Q96ME1 805 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 TCHPQ9BT92 498 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 EPB41L4BQ9H329 900 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 PABPC3Q9H361 631 aaKnown RBP14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 RBAKQ9NYW8 714 aaPredicted RBP14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 UVRAGQ9P2Y5 699 aa14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 MTRF1LQ9UGC7 380 aaKnown RBP14.82□□□□□ -0.04
CACNA1C-231ENST00000616390 UMODL1Q5DID0 1318 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 ZNF541Q9H0D2 1346 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 ACSL3O95573 720 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 MARK3P27448 753 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 PRUNE1Q86TP1 453 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 MCOLN2Q8IZK6 566 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 PWWP2AQ96N64 755 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 HERPUD2Q9BSE4 406 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 MSTO1Q9BUK6 570 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 MROH7Q68CQ1 1323 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 EXTL3O43909 919 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 DKC1O60832 514 aaKnown RBP eCLIP14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 ECEL1O95672 775 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 SUPT20HL2P0C7V6 817 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 GARTP22102 1010 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 KRT17Q04695 432 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 QPCTQ16769 361 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 SUPT20HL1Q3ZLR7 823 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 XKR3Q5GH77 459 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 B4GALNT4Q76KP1 1039 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 TADA2BQ86TJ2 420 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 EFCAB13Q8IY85 973 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 RDM1Q8NG50 284 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 TMEM174Q8WUU8 243 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 RAPGEF5Q92565 580 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 C17orf75Q9HAS0 396 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 PDLIM7Q9NR12 457 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 GGA3Q9NZ52 723 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 ARHGAP28Q9P2N2 729 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 PCYOX1Q9UHG3 505 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 SLC12A6Q9UHW9 1150 aa14.81□□□□□ -0.04
CACNA1C-231ENST00000616390 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 GMNCA6NCL1 334 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 TTLL13PA6NNM8 815 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 PODXLO00592 558 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 EDN1P05305 212 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 GLRA2P23416 452 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 DRP2Q13474 957 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 ZNF280DQ6N043 979 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 CATSPERGQ6ZRH7 1159 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 OR5B17Q8NGF7 314 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 PPM1EQ8WY54 764 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 HVCN1Q96D96 273 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 DDX23Q9BUQ8 820 aaKnown RBP14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 SUDS3Q9H7L9 328 aaPredicted RBP14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 ARID2Q68CP9 1835 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 SPDYE16A6NNV3 312 aaPredicted RBP14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 FOXO6A8MYZ6 492 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 SPATA31C2B4DYI2 1134 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 PMM2O15305 246 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 RGS16O15492 202 aaPredicted RBP14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 VNN1O95497 513 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 CD58P19256 250 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 CALCOCO2Q13137 446 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 SIX1Q15475 284 aaPredicted RBP14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 STXBP2Q15833 593 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 CLUL1Q15846 466 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 TTC31Q49AM3 519 aaPredicted RBP14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 AGBL2Q5U5Z8 902 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 SLC7A3Q8WY07 619 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 SENP7Q9BQF6 1050 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 TXLNGYQ9BZA5 131 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 APOBEC3GQ9HC16 384 aaKnown RBP14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 PARP14Q460N5 1801 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 PASKQ96RG2 1323 aa14.8□□□□□ -0.04
CACNA1C-231ENST00000616390 A0A087WUV0 522 aaPredicted RBP14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 THAP12O43422 761 aa14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 FAM107AO95990 144 aa14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 FDX1P10109 184 aa14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 UNGP13051 313 aaPredicted RBP14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 HSPA6P17066 643 aa14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 GNA15P30679 374 aa14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 XRRA1Q6P2D8 792 aa14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 CRELD2Q6UXH1 353 aaPredicted RBP14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 CPLX4Q7Z7G2 160 aa14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 PSPC1Q8WXF1 523 aaKnown RBP14.79□□□□□ -0.04
CACNA1C-231ENST00000616390 PAGR1Q9BTK6 254 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms