RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 CSRNP2Q9H175 543 aa7.66□□□□□ -1.18
MUC1-227ENST00000615517 SCUBE2Q9NQ36 999 aa7.66□□□□□ -1.18
MUC1-227ENST00000615517 GTSE1Q9NYZ3 720 aa7.66□□□□□ -1.18
MUC1-227ENST00000615517 DACH1Q9UI36 760 aa7.66□□□□□ -1.18
MUC1-227ENST00000615517 SLC8A2Q9UPR5 921 aa7.66□□□□□ -1.18
MUC1-227ENST00000615517 RAI2Q9Y5P3 530 aa7.66□□□□□ -1.18
MUC1-227ENST00000615517 CNTNAP5Q8WYK1 1306 aa7.66□□□□□ -1.18
MUC1-227ENST00000615517 MGAQ8IWI9 3026 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 CCDC194A0A1B0GVG4 234 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 DDX11L8A8MPP1 907 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 H0Y626 953 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 SH2B2O14492 632 aaPredicted RBP7.65□□□□□ -1.18
MUC1-227ENST00000615517 ZNF197O14709 1029 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 OBSL1O75147 1896 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 TRIM16O95361 564 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 SEC24AO95486 1093 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 LRG1P02750 347 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 CALM1P0DP23 149 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 CALM2P0DP24 149 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 CALM3P0DP25 149 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 CIITAP33076 1130 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 NPEPPSP55786 919 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 LAMTOR4Q0VGL1 99 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 SEMA3BQ13214 749 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 TUSC3Q13454 348 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 TEAD2Q15562 447 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 ELF2Q15723 593 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 NAB2Q15742 525 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 AMHR2Q16671 573 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 PMS2CLQ68D20 193 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 FSTL4Q6MZW2 842 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 CD300LGQ6UXG3 332 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
MUC1-227ENST00000615517 PDZD4Q76G19 769 aaPredicted RBP7.65□□□□□ -1.18
MUC1-227ENST00000615517 CDR2LQ86X02 465 aaPredicted RBP7.65□□□□□ -1.18
MUC1-227ENST00000615517 TEX2Q8IWB9 1127 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 TMEM143Q96AN5 459 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 CHFRQ96EP1 664 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 HHIPQ96QV1 700 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 SLC32A1Q9H598 525 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 CCDC86Q9H6F5 360 aaKnown RBP7.65□□□□□ -1.18
MUC1-227ENST00000615517 INVSQ9Y283 1065 aa7.65□□□□□ -1.18
MUC1-227ENST00000615517 ATMQ13315 3056 aa7.65□□□□□ -1.19
MUC1-227ENST00000615517 PTGESO14684 152 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 ABLIM3O94929 683 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 ARF4P18085 180 aaPredicted RBP7.64□□□□□ -1.19
MUC1-227ENST00000615517 BCKDHBP21953 392 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 TKTP29401 623 aaKnown RBP7.64□□□□□ -1.19
MUC1-227ENST00000615517 AXLP30530 894 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 SFNP31947 248 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 JAK3P52333 1124 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 ROR1Q01973 937 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 TNK2Q07912 1038 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 FUT2Q10981 343 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 NOTUMQ6P988 496 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 PDXDC1Q6P996 788 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 B3GNT9Q6UX72 402 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 CCNI2Q6ZMN8 369 aaPredicted RBP7.64□□□□□ -1.19
MUC1-227ENST00000615517 YAF2Q8IY57 180 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 CAMKK1Q8N5S9 505 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 FANCBQ8NB91 859 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 ZNF461Q8TAF7 563 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 SHKBP1Q8TBC3 707 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 SLC39A7Q92504 469 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 SLC5A5Q92911 643 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 CCDC51Q96ER9 411 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 DDX27Q96GQ7 796 aaKnown RBP7.64□□□□□ -1.19
MUC1-227ENST00000615517 HNRNPABQ99729 332 aaKnown RBP7.64□□□□□ -1.19
MUC1-227ENST00000615517 BARHL2Q9NY43 387 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 CEP72Q9P209 647 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 RCAN3Q9UKA8 241 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 BACE2Q9Y5Z0 518 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 CITO14578 2027 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 ANK1P16157 1881 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 TEX15Q9BXT5 2789 aa7.64□□□□□ -1.19
MUC1-227ENST00000615517 MUC22E2RYF6 1773 aaPredicted RBP7.64□□□□□ -1.19
MUC1-227ENST00000615517 TEP1Q99973 2627 aaKnown RBP7.64□□□□□ -1.19
MUC1-227ENST00000615517 KNL1Q8NG31 2342 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 DOPEY2Q9Y3R5 2298 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 ZMYM2Q9UBW7 1377 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 CCDC69A6NI79 296 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 UPK3BL1B0FP48 263 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 UPK3BL2E5RIL1 263 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 HIP1O00291 1037 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 B4GALT5O43286 388 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 PRC1O43663 620 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 GAS7O60861 476 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 PSMD10O75832 226 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 ERLIN2O94905 339 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 NPTXRO95502 500 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 MYL4P12829 197 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 GBP1P32455 592 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 MAPK8P45983 427 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 EPHA5P54756 1037 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 ELAVL2Q12926 359 aaKnown RBP7.63□□□□□ -1.19
MUC1-227ENST00000615517 KARSQ15046 597 aaKnown RBP7.63□□□□□ -1.19
MUC1-227ENST00000615517 TMEM196Q5HYL7 178 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 STXBP5Q5T5C0 1151 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 CYP4A22Q5TCH4 519 aa7.63□□□□□ -1.19
MUC1-227ENST00000615517 SLC8B1Q6J4K2 584 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms