RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ZNF202O95125 648 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 VNN2O95498 520 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 SOD2P04179 222 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 ASGR2P07307 311 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 CYP2J2P51589 502 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 ZBTB6Q15916 424 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 XKR4Q5GH76 650 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 IER5LQ5T953 404 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 EFHBQ8N7U6 833 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 SAMD11Q96NU1 681 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 CNTN3Q9P232 1028 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 CFAP45Q9UL16 551 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 RBM19Q9Y4C8 960 aaKnown RBP6.21□□□□□ -1.42
CPNE3-208ENST00000614678 MCF2P10911 925 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 BMP6P22004 513 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 CMA1P23946 247 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 KLRC2P26717 231 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 TXLNAP40222 546 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 SYKP43405 635 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 EPM2AIP1Q7L775 607 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 IQUBQ8NA54 791 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 ATXN2LQ8WWM7 1075 aaKnown RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 RSAD2Q8WXG1 361 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 DDX27Q96GQ7 796 aaKnown RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 C11orf16Q9NQ32 467 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 AGO2Q9UKV8 859 aaKnown RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 NME7Q9Y5B8 376 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 CDY1Q9Y6F8 540 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 CST3P01034 146 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 OR1D2P34982 312 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 CAMK4Q16566 473 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 FMR1NBQ8N0W7 255 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 ENGASEQ8NFI3 743 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 CXorf38Q8TB03 319 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 GPR152Q8TDT2 470 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 ZNF516Q92618 1163 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 C7orf25Q9BPX7 421 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 RHOBTB2Q9BYZ6 727 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 C17orf75Q9HAS0 396 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 MAN1C1Q9NR34 630 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 LMCD1Q9NZU5 365 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 KCND2Q9NZV8 630 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 MUTYHQ9UIF7 546 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 BIN1O00499 593 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 SEC24AO95486 1093 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 SLFN14P0C7P3 912 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 SKIP12755 728 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 DCAF4L1Q3SXM0 396 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 FAM26FQ5R3K3 315 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 L1TD1Q5T7N2 865 aaKnown RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 ZPBP2Q6X784 338 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 ZNF710Q8N1W2 664 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 IL27Q8NEV9 243 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 CCDC127Q96BQ5 260 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 CCDC51Q96ER9 411 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 RPP25Q9BUL9 199 aaKnown RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 CCDC94Q9BW85 323 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 MTMR12Q9C0I1 747 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 TNMDQ9H2S6 317 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 ADAM7Q9H2U9 754 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 PUF60Q9UHX1 559 aaKnown RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 RWDD3Q9Y3V2 267 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 TRIM49BA6NDI0 452 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 OGTO15294 1046 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 GJA1P17302 382 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 DSG1Q02413 1049 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 SMC1AQ14683 1233 aaKnown RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 LEXMQ3ZCV2 418 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 ANKRD54Q6NXT1 300 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 KRBA2Q6ZNG9 492 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 SYCP3Q8IZU3 236 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 OLFML3Q9NRN5 406 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 MRPL17Q9NRX2 175 aaKnown RBP6.2□□□□□ -1.42
CPNE3-208ENST00000614678 SIX4Q9UIU6 781 aa6.2□□□□□ -1.42
CPNE3-208ENST00000614678 ASPMQ8IZT6 3477 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 WDR27A2RRH5 827 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 PIGRP01833 764 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 CD44P16070 742 aaKnown RBP6.19□□□□□ -1.42
CPNE3-208ENST00000614678 GLUD2P49448 558 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 TFAMQ00059 246 aaKnown RBP6.19□□□□□ -1.42
CPNE3-208ENST00000614678 ZP2Q05996 745 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 BECN1Q14457 450 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 CBX2Q14781 532 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-208ENST00000614678 KIAA1841Q6NSI8 718 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 C1orf127Q8N9H9 656 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 RTP3Q9BQQ7 232 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 KANSL3Q9P2N6 904 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 SLC27A5Q9Y2P5 690 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 STK24Q9Y6E0 443 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 STYXL1Q9Y6J8 313 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 PDGFBP01127 241 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-208ENST00000614678 KCNE1P15382 129 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 ACAT1P24752 427 aaKnown RBP6.19□□□□□ -1.42
CPNE3-208ENST00000614678 SSTR3P32745 418 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-208ENST00000614678 PPM1AP35813 382 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 ORC1Q13415 861 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 VARS2Q5ST30 1063 aaKnown RBP6.19□□□□□ -1.42
CPNE3-208ENST00000614678 SDHAF4Q5VUM1 108 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 UNC13DQ70J99 1090 aa6.19□□□□□ -1.42
CPNE3-208ENST00000614678 LRRTM3Q86VH5 581 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms