RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 BTG3Q14201 252 aaPredicted RBP15.88■□□□□ 0.13
CD48-203ENST00000613788 ZACNQ401N2 412 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 MIIPQ5JXC2 388 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 FKBP15Q5T1M5 1219 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 C15orf39Q6ZRI6 1047 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 CMTR2Q8IYT2 770 aaKnown RBP15.88■□□□□ 0.13
CD48-203ENST00000613788 LRRC43Q8N309 656 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 C18orf25Q96B23 403 aaPredicted RBP15.88■□□□□ 0.13
CD48-203ENST00000613788 DDX27Q96GQ7 796 aaKnown RBP15.88■□□□□ 0.13
CD48-203ENST00000613788 UROC1Q96N76 676 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 TLL1O43897 1013 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 TPM3P06753 285 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 RPL9P32969 192 aaKnown RBP15.87■□□□□ 0.13
CD48-203ENST00000613788 UBASH3AP57075 661 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 RBP5P82980 135 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 MYL7Q01449 175 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 TRPC3Q13507 836 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 NAB2Q15742 525 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 CBWD6Q4V339 395 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 PAN2Q504Q3 1202 aaKnown RBP15.87■□□□□ 0.13
CD48-203ENST00000613788 CBWD3Q5JTY5 395 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 CBWD5Q5RIA9 395 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 TDRD10Q5VZ19 366 aaKnown RBP15.87■□□□□ 0.13
CD48-203ENST00000613788 APTXQ7Z2E3 356 aaKnown RBP15.87■□□□□ 0.13
CD48-203ENST00000613788 RC3H2Q9HBD1 1191 aaKnown RBP15.87■□□□□ 0.13
CD48-203ENST00000613788 TUBGCP4Q9UGJ1 667 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 CITO14578 2027 aa15.87■□□□□ 0.13
CD48-203ENST00000613788 GTPBP10A4D1E9 387 aaKnown RBP15.86■□□□□ 0.13
CD48-203ENST00000613788 CARNS1A5YM72 827 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 CBFA2T2O43439 604 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 DDHD2O94830 711 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 ALDH2P05091 517 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 ITGB3P05106 788 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 KRT19P08727 400 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 LRPAP1P30533 357 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 SOX4Q06945 474 aaPredicted RBP15.86■□□□□ 0.13
CD48-203ENST00000613788 DSC1Q08554 894 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 ZNF280BQ86YH2 543 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 C1orf127Q8N9H9 656 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 FBXL13Q8NEE6 735 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
CD48-203ENST00000613788 COQ4Q9Y3A0 265 aa15.86■□□□□ 0.13
CD48-203ENST00000613788 A0A1B0GTH6 734 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 LGALS16A8MUM7 142 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 UBXN1Q04323 297 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 NCOA4Q13772 614 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 GSE1Q14687 1217 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 C9orf57Q5W0N0 161 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 SARM1Q6SZW1 724 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 GBP6Q6ZN66 633 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 COLGALT2Q8IYK4 626 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 CCDC150Q8NCX0 1101 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 FAM84AQ96KN4 292 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 NAP1L5Q96NT1 182 aaPredicted RBP15.85■□□□□ 0.13
CD48-203ENST00000613788 TMEM175Q9BSA9 504 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 NRDE2Q9H7Z3 1164 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 RAB20Q9NX57 234 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 IFNKQ9P0W0 207 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 AGAP1Q9UPQ3 857 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 RALGAPA2Q2PPJ7 1873 aa15.85■□□□□ 0.13
CD48-203ENST00000613788 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.84■□□□□ 0.13
CD48-203ENST00000613788 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.84■□□□□ 0.13
CD48-203ENST00000613788 ANO9A1A5B4 782 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 CASTOR2A6NHX0 329 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 CST3P01034 146 aaPredicted RBP15.84■□□□□ 0.13
CD48-203ENST00000613788 HLA-DRAP01903 254 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 PAX3P23760 479 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 POLR2BP30876 1174 aaKnown RBP15.84■□□□□ 0.13
CD48-203ENST00000613788 ATICP31939 592 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 PNPLA4P41247 253 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 PIK3CAP42336 1068 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 ALDH7A1P49419 539 aaKnown RBP15.84■□□□□ 0.13
CD48-203ENST00000613788 GUCY2FP51841 1108 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 MYO1EQ12965 1108 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 NR1I3Q14994 352 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 EXOC3L4Q17RC7 722 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 SGSM1Q2NKQ1 1148 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 SPOUT1Q5T280 376 aaKnown RBP15.84■□□□□ 0.13
CD48-203ENST00000613788 DCLRE1AQ6PJP8 1040 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 TDHQ8IZJ6 230 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 FIBCD1Q8N539 461 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 LRRC52Q8N7C0 313 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 TAS1R2Q8TE23 839 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 TAF4BQ92750 862 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 IMPG2Q9BZV3 1241 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 TRIM5Q9C035 493 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 GOLGA2P5Q9HBQ8 144 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 SIX4Q9UIU6 781 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 FSD2A1L4K1 749 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 PODXLO00592 558 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 PIRO00625 290 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 ZC3H11AO75152 810 aaKnown RBP eCLIP15.84■□□□□ 0.13
CD48-203ENST00000613788 VNN1O95497 513 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 OR1G1P47890 313 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 CLCNKBP51801 687 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 UPP1Q16831 310 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 WDR44Q5JSH3 913 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 EHBP1Q8NDI1 1231 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 CXorf38Q8TB03 319 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 ZNF560Q96MR9 790 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms