RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PPP2R3CQ969Q6 453 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 CCDC127Q96BQ5 260 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 ANKRD36BP1Q96IX9 119 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 GUCD1Q96NT3 240 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 ENTPD7Q9NQZ7 604 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 TLR9Q9NR96 1032 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 TUBGCP4Q9UGJ1 667 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 CTNND2Q9UQB3 1225 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 KIF4AO95239 1232 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 TNNC2P02585 160 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 DLATP10515 647 aaKnown RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 EPB41P11171 864 aaKnown RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 POU3F3P20264 500 aaPredicted RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 PAX3P23760 479 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 LRPAP1P30533 357 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 NLRP12P59046 1061 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 DUOXA2Q1HG44 320 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 ANKRD40Q6AI12 368 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 KIAA1841Q6NSI8 718 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 CAVIN1Q6NZI2 390 aaKnown RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 FUT10Q6P4F1 479 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 RBM43Q6ZSC3 357 aaKnown RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 INTS8Q75QN2 995 aaKnown RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 TMC7Q7Z402 723 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 FAM186BQ8IYM0 893 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 VPS52Q8N1B4 723 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 HASPINQ8TF76 798 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 BCL7CQ8WUZ0 217 aaPredicted RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 RABGGTAQ92696 567 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 MFSD14AQ96MC6 490 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 TCF25Q9BQ70 676 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 MKNK1Q9BUB5 465 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 NGRNQ9NPE2 291 aaKnown RBP14.35□□□□□ -0.11
MDC1-209ENST00000613547 MARCH5Q9NX47 278 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 DPP3Q9NY33 737 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 RWDD2AQ9UIY3 292 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 ITGA11Q9UKX5 1188 aa14.35□□□□□ -0.11
MDC1-209ENST00000613547 RALGAPA2Q2PPJ7 1873 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 TRIM49BA6NDI0 452 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 SLC16A3O15427 465 aaKnown RBP14.34□□□□□ -0.11
MDC1-209ENST00000613547 AKAP3O75969 853 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 LETM1O95202 739 aaPredicted RBP14.34□□□□□ -0.11
MDC1-209ENST00000613547 FGFR1OPO95684 399 aaKnown RBP14.34□□□□□ -0.11
MDC1-209ENST00000613547 SOD2P04179 222 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 URODP06132 367 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 CA8P35219 290 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 CASP4P49662 377 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 AP3M2P53677 418 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 CT47A1Q5JQC4 288 aaPredicted RBP14.34□□□□□ -0.11
MDC1-209ENST00000613547 EFCAB13Q8IY85 973 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 CSGALNACT2Q8N6G5 542 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 TMC2Q8TDI7 906 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 CEP63Q96MT8 703 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 CGRRF1Q99675 332 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 INTS13Q9NVM9 706 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 CACNG4Q9UBN1 327 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 SSX2IPQ9Y2D8 614 aa14.34□□□□□ -0.11
MDC1-209ENST00000613547 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 F8W810 466 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 CSPG5O95196 566 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 DNAJB1P25685 340 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 PNPLA4P41247 253 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 GLUD2P49448 558 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 PMS1P54277 932 aaKnown RBP14.33□□□□□ -0.12
MDC1-209ENST00000613547 WNT7BP56706 349 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 STX17P56962 302 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 ENPEPQ07075 957 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 ADGRE1Q14246 886 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 SMC1AQ14683 1233 aaKnown RBP14.33□□□□□ -0.12
MDC1-209ENST00000613547 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
MDC1-209ENST00000613547 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 DPCR1Q3MIW9 517 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 C9orf57Q5W0N0 161 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 TTI2Q6NXR4 508 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 PDXDC1Q6P996 788 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 PARD3BQ8TEW8 1205 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 ZNF560Q96MR9 790 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 HERC2P3Q9BVR0 1158 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 MTMR12Q9C0I1 747 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 MRPL17Q9NRX2 175 aaKnown RBP14.33□□□□□ -0.12
MDC1-209ENST00000613547 ANO10Q9NW15 660 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 TMEM63CQ9P1W3 806 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 MTCH2Q9Y6C9 303 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 CHD9Q3L8U1 2897 aa14.33□□□□□ -0.12
MDC1-209ENST00000613547 FSD2A1L4K1 749 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 STX10O60499 249 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 PHACTR2O75167 634 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 GNA14O95837 355 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 ITGB3P05106 788 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 KRT19P08727 400 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 CTSAP10619 480 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 ERCC5P28715 1186 aaPredicted RBP14.32□□□□□ -0.12
MDC1-209ENST00000613547 VAMP7P51809 220 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 GUCY2FP51841 1108 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 ERVFC1P60507 584 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 RBP5P82980 135 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 CREMQ03060 361 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms