RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 PLPP4Q5VZY2 271 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 PDE12Q6L8Q7 609 aaKnown RBP12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 FUT10Q6P4F1 479 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 CD300LGQ6UXG3 332 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 TAS1R1Q7RTX1 841 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 TMC7Q7Z402 723 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 BRSK2Q8IWQ3 736 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 CD302Q8IX05 232 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 GPD1LQ8N335 351 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 C3orf58Q8NDZ4 430 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 HASPINQ8TF76 798 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 UROC1Q96N76 676 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 GBP4Q96PP9 640 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 GPR62Q9BZJ7 368 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 ASB7Q9H672 318 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 ENTPD7Q9NQZ7 604 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 LMBRD1Q9NUN5 540 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 HOOK1Q9UJC3 728 aaKnown RBP12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 MAPK8IP1Q9UQF2 711 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 VWA8A3KMH1 1905 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 TMEM189-UBE2V1I3L0A0 370 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 TADA2AO75478 443 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 B3GAT3O94766 335 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 SMC2O95347 1197 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 SOD2P04179 222 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 NFICP08651 508 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 GTF2F1P35269 517 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 HYAL1Q12794 435 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 ZNF658Q5TYW1 1059 aaPredicted RBP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 JADE1Q6IE81 842 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 DCLRE1AQ6PJP8 1040 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 CBWD2Q8IUF1 395 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 C12orf56Q8IXR9 622 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 SMYD4Q8IYR2 804 aaPredicted RBP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 GUF1Q8N442 669 aaKnown RBP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 MRPL43Q8N983 215 aaKnown RBP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 AUTS2Q8WXX7 1259 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 FBXL18Q96ME1 805 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 TSPAN18Q96SJ8 248 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 NGRNQ9NPE2 291 aaKnown RBP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 PRDM6Q9NQX0 595 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 RMND1Q9NWS8 449 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 RBAKQ9NYW8 714 aaPredicted RBP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 CGNQ9P2M7 1197 aaKnown RBP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 STK39Q9UEW8 545 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 UBQLN1Q9UMX0 589 aaKnown RBP12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 IRAK3Q9Y616 596 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 UNC80Q8N2C7 3258 aa12.29□□□□□ -0.44
CCL3L3-201ENST00000612839 C2orf71A6NGG8 1288 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 PODXLO00592 558 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 PDXKO00764 312 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 CYP3A5P20815 502 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 RPL9P32969 192 aaKnown RBP12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 SMC1AQ14683 1233 aaKnown RBP12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 COL19A1Q14993 1142 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 PTPN14Q15678 1187 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 SPATA1Q5VX52 437 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 RBM23Q86U06 439 aaKnown RBP12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 EFCAB13Q8IY85 973 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 GOLGA5Q8TBA6 731 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 NOC3LQ8WTT2 800 aaKnown RBP12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 TMEM174Q8WUU8 243 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 DDX27Q96GQ7 796 aaKnown RBP12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 B3GALT6Q96L58 329 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 HERC2P3Q9BVR0 1158 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 CHST7Q9NS84 486 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 DERAQ9Y315 318 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 C2CD2Q9Y426 696 aa12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCL3L3-201ENST00000612839 ZNF233A6NK53 670 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 STK25O00506 426 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 PER2O15055 1255 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 XPOTO43592 962 aaKnown RBP12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 LILRB3O75022 631 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 KIF20AO95235 890 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 IL18RAPO95256 599 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 CXCL14O95715 111 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 LRPAP1P30533 357 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 PRCPP42785 496 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 NRIP1P48552 1158 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 CYP2J2P51589 502 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 GUCY2FP51841 1108 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 TMEM132DQ14C87 1099 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 SNRNP35Q16560 246 aaKnown RBP12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 CAMK4Q16566 473 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 DUSP6Q16828 381 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 KIAA0319Q5VV43 1072 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 XXYLT1Q8NBI6 393 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 RDH13Q8NBN7 331 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 PPP2R3CQ969Q6 453 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 TLE6Q9H808 572 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 KIAA1586Q9HCI6 787 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 PDE11AQ9HCR9 933 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 DMAC2Q9NW81 257 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 MAN1B1Q9UKM7 699 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 TRAF3IP3Q9Y228 551 aa12.27□□□□□ -0.44
CCL3L3-201ENST00000612839 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms