RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 RXFP1Q9HBX9 757 aa19.66■□□□□ 0.74
SEMA3B-211ENST00000612509 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.66■□□□□ 0.74
SEMA3B-211ENST00000612509 UBQLN1Q9UMX0 589 aaKnown RBP19.66■□□□□ 0.74
SEMA3B-211ENST00000612509 FAM50BQ9Y247 325 aa19.66■□□□□ 0.74
SEMA3B-211ENST00000612509 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.66■□□□□ 0.74
SEMA3B-211ENST00000612509 TEX28O15482 410 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 MYL1P05976 194 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 ADH1AP07327 375 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 NFICP08651 508 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 EPCAMP16422 314 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 RPL9P32969 192 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 SLC22A17Q8WUG5 538 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 FAM212AQ96EL1 285 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 SAAL1Q96ER3 474 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 CBWD1Q9BRT8 395 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 TTPALQ9BTX7 342 aa19.65■□□□□ 0.74
SEMA3B-211ENST00000612509 XPOTO43592 962 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 PRR29P0C7W0 189 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 CYP3A5P20815 502 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 KLRC2P26717 231 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 LRPAP1P30533 357 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 HOXD13P35453 343 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 BRCC3P46736 316 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 CLCN4P51793 760 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 POU5F1Q01860 360 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 CREMQ03060 361 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 SMAD2Q15796 467 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 JADE1Q6IE81 842 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 ARMCX5Q6P1M9 558 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 SYCE2Q6PIF2 218 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 PRSS55Q6UWB4 352 aaPredicted RBP19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 CRELD2Q6UXH1 353 aaPredicted RBP19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 KRBA2Q6ZNG9 492 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 TMEM130Q8N3G9 435 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 SCFD1Q8WVM8 642 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 PIK3R5Q8WYR1 880 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 TSPAN18Q96SJ8 248 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 SLC39A2Q9NP94 309 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 EXOC1Q9NV70 894 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 DZANK1Q9NVP4 752 aa19.64■□□□□ 0.73
SEMA3B-211ENST00000612509 I3L4J1 428 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 ZNF202O95125 648 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 HOXB8P17481 243 aaPredicted RBP19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 FGFR3P22607 806 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 GUCY2FP51841 1108 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 TMEM132DQ14C87 1099 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 ZBTB6Q15916 424 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 PSMD5Q16401 504 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 BMT2Q1RMZ1 405 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 KMT5BQ4FZB7 885 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 CEP57Q86XR8 500 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 BRSK2Q8IWQ3 736 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 ZSWIM2Q8NEG5 633 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 ZNF507Q8TCN5 953 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 FAM213AQ9BRX8 229 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 ASB7Q9H672 318 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 FNIP2Q9P278 1114 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 DERAQ9Y315 318 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 C2CD2Q9Y426 696 aa19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 USP15Q9Y4E8 981 aaPredicted RBP19.63■□□□□ 0.73
SEMA3B-211ENST00000612509 TTC28Q96AY4 2481 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 GOLGA6L4A6NEF3 574 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 TRAPPC3O43617 180 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 LDHAP00338 332 aaKnown RBP19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 RPL17P18621 184 aaKnown RBP19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 TKTP29401 623 aaKnown RBP19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 NELFCDQ8IXH7 590 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 KIAA0895Q8NCT3 520 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 BEST2Q8NFU1 509 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 LNX1Q8TBB1 728 aaPredicted RBP19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 FBXL18Q96ME1 805 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 APOL5Q9BWW9 433 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 PCIF1Q9H4Z3 704 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 NUB1Q9Y5A7 615 aa19.62■□□□□ 0.73
SEMA3B-211ENST00000612509 GOLGA8IPA6NC78 632 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 GOLGA8JA6NMD2 632 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 KIAA0391O15091 583 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 EXTL3O43909 919 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 IL18RAPO95256 599 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 GLUD1P00367 558 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 RPN1P04843 607 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 MCM4P33991 863 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 DPYDQ12882 1025 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 SPATA1Q5VX52 437 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 PDXDC1Q6P996 788 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 GLYCTKQ8IVS8 523 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 EFCAB13Q8IY85 973 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 GPD1LQ8N335 351 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 SUSD6Q92537 303 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 S1PR5Q9H228 398 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 SFXN1Q9H9B4 322 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 MAN1C1Q9NR34 630 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 AGPAT3Q9NRZ7 376 aa19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 RBAKQ9NYW8 714 aaPredicted RBP19.61■□□□□ 0.73
SEMA3B-211ENST00000612509 TSC2P49815 1807 aa19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 SYN3O14994 580 aa19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 TGFB1I1O43294 461 aa19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 WNT7BP56706 349 aa19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 STK4Q13043 487 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms