RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 HSPA9P38646 679 aaKnown RBP17.04■□□□□ 0.32
RTN1-209ENST00000611068 SPRYD7Q5W111 196 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 CEP63Q96MT8 703 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 CYP26B1Q9NR63 512 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 AGPAT3Q9NRZ7 376 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 TRIM33Q9UPN9 1127 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 SLC9A1P19634 815 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 LBRQ14739 615 aaKnown RBP17.04■□□□□ 0.32
RTN1-209ENST00000611068 EDRF1Q3B7T1 1238 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 CCDC38Q502W7 563 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 OTUD6AQ7L8S5 288 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 ANKS4BQ8N8V4 417 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 SLC17A8Q8NDX2 589 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 PPP1R13LQ8WUF5 828 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 XPO6Q96QU8 1125 aaKnown RBP17.04■□□□□ 0.32
RTN1-209ENST00000611068 PCYT2Q99447 389 aa17.04■□□□□ 0.32
RTN1-209ENST00000611068 NHEJ1Q9H9Q4 299 aaPredicted RBP17.04■□□□□ 0.32
RTN1-209ENST00000611068 PDLIM1O00151 329 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 LYPLA2O95372 231 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 SHBGP04278 402 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 EDNRBP24530 442 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 NPTX2P47972 431 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 ZNF157P51786 506 aaPredicted RBP17.03■□□□□ 0.32
RTN1-209ENST00000611068 KIF5AQ12840 1032 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 SGSM1Q2NKQ1 1148 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 TSR1Q2NL82 804 aaKnown RBP17.03■□□□□ 0.32
RTN1-209ENST00000611068 GLG1Q92896 1179 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 FAM84AQ96KN4 292 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 ZNF317Q96PQ6 595 aaPredicted RBP17.03■□□□□ 0.32
RTN1-209ENST00000611068 ERGIC2Q96RQ1 377 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 ELAC2Q9BQ52 826 aaKnown RBP17.03■□□□□ 0.32
RTN1-209ENST00000611068 TTYH3Q9C0H2 523 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 KCND2Q9NZV8 630 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 PNMA3Q9UL41 463 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 LRRC42Q9Y546 428 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 NFASCO94856 1347 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 TPD52L2O43399 206 aaKnown RBP17.03■□□□□ 0.32
RTN1-209ENST00000611068 EXOC3O60645 756 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 STAM2O75886 525 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 POLR2FP61218 127 aaKnown RBP17.03■□□□□ 0.32
RTN1-209ENST00000611068 MPP3Q13368 585 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 HS2ST1Q7LGA3 356 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 ELMO3Q96BJ8 720 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 NDNQ99608 321 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 XPNPEP1Q9NQW7 623 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 HYOU1Q9Y4L1 999 aa17.03■□□□□ 0.32
RTN1-209ENST00000611068 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
RTN1-209ENST00000611068 XRCC5P13010 732 aaKnown RBP17.02■□□□□ 0.32
RTN1-209ENST00000611068 PAFAH1B1P43034 410 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 MSH2P43246 934 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 POLGP54098 1239 aaPredicted RBP17.02■□□□□ 0.32
RTN1-209ENST00000611068 ERMARDQ5T6L9 678 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 MFSD4BQ5TF39 518 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 OR52E8Q6IFG1 317 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 GJB7Q6PEY0 223 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 CACNA2D4Q7Z3S7 1137 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 LMNTD2Q8IXW0 634 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 FAM186BQ8IYM0 893 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 TRAPPC12Q8WVT3 735 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 DTNBP1Q96EV8 351 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 IFT43Q96FT9 208 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 ANKEF1Q9NU02 776 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 ADGRA3Q8IWK6 1321 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 DNAJC25-GNG10A0A024R161 153 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 DENND3A2RUS2 1198 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 LRRC53A6NM62 1247 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 ANKRD63C9JTQ0 380 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 NOP56O00567 594 aaKnown RBP17.02■□□□□ 0.32
RTN1-209ENST00000611068 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.32
RTN1-209ENST00000611068 CTNNA1P35221 906 aaKnown RBP17.02■□□□□ 0.32
RTN1-209ENST00000611068 DYNC1I2Q13409 638 aaKnown RBP17.02■□□□□ 0.32
RTN1-209ENST00000611068 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 KCTD17Q8N5Z5 321 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 WHAMMQ8TF30 809 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 UCMAQ8WVF2 138 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 MROH8Q9H579 483 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 KMT5AQ9NQR1 393 aa17.02■□□□□ 0.32
RTN1-209ENST00000611068 LRRN2O75325 713 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 ITGBL1O95965 494 aaPredicted RBP17.01■□□□□ 0.31
RTN1-209ENST00000611068 GNAZP19086 355 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 RPL13P26373 211 aaKnown RBP17.01■□□□□ 0.31
RTN1-209ENST00000611068 ICAM3P32942 547 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 DNA2P51530 1060 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 STAT5BP51692 787 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 DLG4P78352 724 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 LRIG3Q6UXM1 1119 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 ARMCX2Q7L311 632 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 PIGWQ7Z7B1 504 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 LRRC34Q8IZ02 419 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 KLHL29Q96CT2 875 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 KRT12Q99456 494 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 FAM129AQ9BZQ8 928 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
RTN1-209ENST00000611068 SEL1LQ9UBV2 794 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 TACC1O75410 805 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 TCP1P17987 556 aaKnown RBP17.01■□□□□ 0.31
RTN1-209ENST00000611068 CYLC1P35663 651 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms