RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 EXOC7Q9UPT5 735 aa23.78■■□□□ 1.4
SHANK2-220ENST00000608988 A0A1W2PRG0 241 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 CETPP11597 493 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 FAM98CQ17RN3 349 aaKnown RBP23.77■■□□□ 1.4
SHANK2-220ENST00000608988 IZUMO3Q5VZ72 239 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 ANKS1BQ7Z6G8 1248 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 USP37Q86T82 979 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 ZFPM1Q8IX07 1006 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 PLEKHO2Q8TD55 490 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 TMC2Q8TDI7 906 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 GRIN3BO60391 1043 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 PEX11AO75192 247 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 RXRBP28702 533 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 MRPS35P82673 323 aaKnown RBP23.77■■□□□ 1.4
SHANK2-220ENST00000608988 TMEM63BQ5T3F8 832 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 PTF1AQ7RTS3 328 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 DHX38Q92620 1227 aaKnown RBP23.77■■□□□ 1.4
SHANK2-220ENST00000608988 TLE6Q9H808 572 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 SSU72Q9NP77 194 aaKnown RBP23.77■■□□□ 1.4
SHANK2-220ENST00000608988 SAR1AQ9NR31 198 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 SPATS2LQ9NUQ6 558 aaKnown RBP23.77■■□□□ 1.4
SHANK2-220ENST00000608988 PHTF1Q9UMS5 762 aa23.77■■□□□ 1.4
SHANK2-220ENST00000608988 ZC3H11AO75152 810 aaKnown RBP eCLIP23.76■■□□□ 1.39
SHANK2-220ENST00000608988 LYPLA2O95372 231 aa23.76■■□□□ 1.39
SHANK2-220ENST00000608988 MAGEA4P43358 317 aa23.76■■□□□ 1.39
SHANK2-220ENST00000608988 CCNHP51946 323 aaPredicted RBP23.76■■□□□ 1.39
SHANK2-220ENST00000608988 TMED2Q15363 201 aa23.76■■□□□ 1.39
SHANK2-220ENST00000608988 NSMFQ6X4W1 530 aa23.76■■□□□ 1.39
SHANK2-220ENST00000608988 ERP27Q96DN0 273 aa23.76■■□□□ 1.39
SHANK2-220ENST00000608988 CHKBQ9Y259 395 aa23.76■■□□□ 1.39
SHANK2-220ENST00000608988 MRPL11Q9Y3B7 192 aaKnown RBP23.76■■□□□ 1.39
SHANK2-220ENST00000608988 EDF1O60869 148 aaKnown RBP23.75■■□□□ 1.39
SHANK2-220ENST00000608988 P4HBP07237 508 aaKnown RBP23.75■■□□□ 1.39
SHANK2-220ENST00000608988 ATP6V1C1P21283 382 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 FKBP1AP62942 108 aaKnown RBP23.75■■□□□ 1.39
SHANK2-220ENST00000608988 RNASELQ05823 741 aaKnown RBP23.75■■□□□ 1.39
SHANK2-220ENST00000608988 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.75■■□□□ 1.39
SHANK2-220ENST00000608988 KATNAL2Q8IYT4 538 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 MCOLN2Q8IZK6 566 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 ATG4AQ8WYN0 398 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 LNPEPQ9UIQ6 1025 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 GSTTP1A0A1W2PQM5 241 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 FAM170AA1A519 330 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 RIMBP2O15034 1052 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 CFBP00751 764 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 STAT2P52630 851 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 TSNAXIP1Q2TAA8 658 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 SLC45A4Q5BKX6 768 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 PPP1R2P3Q6NXS1 205 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 TUBB6Q9BUF5 446 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 SLC24A3Q9HC58 644 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 TBK1Q9UHD2 729 aa23.75■■□□□ 1.39
SHANK2-220ENST00000608988 MROH7Q68CQ1 1323 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 EXOC1LA0A1B0GW35 172 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 DDTLA6NHG4 134 aaPredicted RBP23.74■■□□□ 1.39
SHANK2-220ENST00000608988 IPO5O00410 1097 aaKnown RBP23.74■■□□□ 1.39
SHANK2-220ENST00000608988 PROSCO94903 275 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 TPBGLP0DKB5 382 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 UNGP13051 313 aaPredicted RBP23.74■■□□□ 1.39
SHANK2-220ENST00000608988 ACADSP16219 412 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 RRM1P23921 792 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 KLRC2P26717 231 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 CETN2P41208 172 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 GCNT1Q02742 428 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 LBRQ14739 615 aaKnown RBP23.74■■□□□ 1.39
SHANK2-220ENST00000608988 TNIP1Q15025 636 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 FAM196AQ6ZSG2 479 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 NIPA1Q7RTP0 329 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 HAUS6Q7Z4H7 955 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 RHOT1Q8IXI2 618 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 FAM13CQ8NE31 585 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 FBXL13Q8NEE6 735 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 LRRC8CQ8TDW0 803 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 SEMA4DQ92854 862 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 RBM15Q96T37 977 aaKnown RBP eCLIP23.74■■□□□ 1.39
SHANK2-220ENST00000608988 OSBPL1AQ9BXW6 950 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 SLC24A2Q9UI40 661 aa23.74■■□□□ 1.39
SHANK2-220ENST00000608988 COL2A1P02458 1487 aaPredicted RBP23.74■■□□□ 1.39
SHANK2-220ENST00000608988 ABL2P42684 1182 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 NCKAP1LP55160 1127 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 BPIFB4P59827 614 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 TRIP13Q15645 432 aaPredicted RBP23.73■■□□□ 1.39
SHANK2-220ENST00000608988 GRIPAP1Q4V328 841 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 RBM26Q5T8P6 1007 aaKnown RBP23.73■■□□□ 1.39
SHANK2-220ENST00000608988 NAIF1Q69YI7 327 aaPredicted RBP23.73■■□□□ 1.39
SHANK2-220ENST00000608988 DRICH1Q6PGQ1 229 aaPredicted RBP23.73■■□□□ 1.39
SHANK2-220ENST00000608988 EXD1Q8NHP7 514 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 ZNF483Q8TF39 744 aaPredicted RBP23.73■■□□□ 1.39
SHANK2-220ENST00000608988 C10orf82Q8WW14 230 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 SMC6Q96SB8 1091 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 TRABDQ9H4I3 376 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 FAM198AQ9UFP1 575 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 ADRB2P07550 413 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 ARP10275 920 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 ADSSP30520 456 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 VPS72Q15906 364 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 AOC3Q16853 763 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 SHROOM1Q2M3G4 852 aaPredicted RBP23.73■■□□□ 1.39
SHANK2-220ENST00000608988 SGSM1Q2NKQ1 1148 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 ZC3H12AQ5D1E8 599 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms