RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 TLR9Q9NR96 1032 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 TBC1D13Q9NVG8 400 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 MAPK8IP1Q9UQF2 711 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 IPPQ9Y573 584 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 PLXNA3P51805 1871 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 CTAGE15A4D2H0 777 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ARHGEF35A5YM69 484 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 LRRIQ4A6NIV6 560 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 HIDE1A8MVS5 230 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 FSCN2O14926 492 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 PER2O15055 1255 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ZC3H11AO75152 810 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 DDHD2O94830 711 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 IPO7O95373 1038 aaKnown RBP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 CTAGE8P0CG41 777 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 CYP11B2P19099 503 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 PLA2G4AP47712 749 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 NRIP1P48552 1158 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 RAB27AP51159 221 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 BCAR1P56945 870 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ZBED6P86452 979 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 PSMD2Q13200 908 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 TFDP1Q14186 410 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 LEXMQ3ZCV2 418 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 FKBP15Q5T1M5 1219 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 PLPP4Q5VZY2 271 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 UNC13DQ70J99 1090 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 MRPL10Q7Z7H8 261 aaKnown RBP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 CTAGE6Q86UF2 777 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 CTAGE4Q8IX94 777 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 SLC39A11Q8N1S5 342 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ZNF558Q96NG5 402 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ERGIC2Q96RQ1 377 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 NFKBIZQ9BYH8 718 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 UBXN6Q9BZV1 441 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 NXF3Q9H4D5 531 aaKnown RBP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 NRDE2Q9H7Z3 1164 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 CD320Q9NPF0 282 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 AAASQ9NRG9 546 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 RAB21Q9UL25 225 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 NCOR1O75376 2440 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 TRIOO75962 3097 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 PDCD11Q14690 1871 aaKnown RBP11.44□□□□□ -0.58
LINC01001-203ENST00000607448 TNFRSF10AO00220 468 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 MUTP22033 750 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 PMS1P54277 932 aaKnown RBP11.44□□□□□ -0.58
LINC01001-203ENST00000607448 PLCB3Q01970 1234 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 ADAM15Q13444 863 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 NOMO2Q5JPE7 1267 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 TAF3Q5VWG9 929 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 CENPPQ6IPU0 288 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 PTCRAQ6ISU1 281 aaPredicted RBP11.44□□□□□ -0.58
LINC01001-203ENST00000607448 GLB1LQ6UWU2 654 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 MCPH1Q8NEM0 835 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 VN1R2Q8NFZ6 395 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 LRRC15Q8TF66 581 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC01001-203ENST00000607448 CDK5RAP3Q96JB5 506 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 PKNOX2Q96KN3 472 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 RPGRIP1Q96KN7 1286 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 CNOT6LQ96LI5 555 aaKnown RBP11.44□□□□□ -0.58
LINC01001-203ENST00000607448 PLIN2Q99541 437 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 MRPL9Q9BYD2 267 aaKnown RBP11.44□□□□□ -0.58
LINC01001-203ENST00000607448 IRX2Q9BZI1 471 aaPredicted RBP11.44□□□□□ -0.58
LINC01001-203ENST00000607448 TTYH3Q9C0H2 523 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 RSAD1Q9HA92 442 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 MIOSQ9NXC5 875 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 MYO6Q9UM54 1294 aa11.44□□□□□ -0.58
LINC01001-203ENST00000607448 EIF3CLB5ME19 914 aaKnown RBP11.43□□□□□ -0.58
LINC01001-203ENST00000607448 RNF225M0QZC1 329 aaPredicted RBP11.43□□□□□ -0.58
LINC01001-203ENST00000607448 PES1O00541 588 aaKnown RBP11.43□□□□□ -0.58
LINC01001-203ENST00000607448 KRT86O43790 486 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 POMCP01189 267 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 SKIP12755 728 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 MLH1P40692 756 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 MTIF2P46199 727 aaKnown RBP11.43□□□□□ -0.58
LINC01001-203ENST00000607448 SLC11A1P49279 550 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 UBE3AQ05086 875 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 LRRC63Q05C16 580 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 GPS2Q13227 327 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 KRT79Q5XKE5 535 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 ANKRD40Q6AI12 368 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 NOTUMQ6P988 496 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 DAW1Q8N136 415 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
LINC01001-203ENST00000607448 MICAL1Q8TDZ2 1067 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 ZFP42Q96MM3 310 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 EIF3CQ99613 913 aaKnown RBP11.43□□□□□ -0.58
LINC01001-203ENST00000607448 TCF25Q9BQ70 676 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 RUSC1Q9BVN2 902 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 APOL6Q9BWW8 343 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 VN1R3Q9BXE9 311 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 TSGA10Q9BZW7 698 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 CCDC113Q9H0I3 377 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 CXCL16Q9H2A7 254 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 FZD8Q9H461 694 aa11.43□□□□□ -0.58
LINC01001-203ENST00000607448 SPG21Q9NZD8 308 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms