RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 RHDQ02161 417 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 VPS72Q15906 364 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 MAP9Q49MG5 647 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 PABPC1LQ4VXU2 614 aaKnown RBP4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 NAIF1Q69YI7 327 aaPredicted RBP4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 DRICH1Q6PGQ1 229 aaPredicted RBP4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 DBX2Q6ZNG2 339 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 SGMS1Q86VZ5 419 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 ZFPM1Q8IX07 1006 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 SH2D3CQ8N5H7 860 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 TFAP2CQ92754 450 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 EDAQ92838 391 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 SLC35A4Q96G79 324 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 C8orf49Q96NF6 230 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 MNTQ99583 582 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 C1QTNF3Q9BXJ4 246 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 MRPL46Q9H2W6 279 aaKnown RBP4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 GSTO2Q9H4Y5 243 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 ARNT2Q9HBZ2 717 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 SPON1Q9HCB6 807 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 STAP2Q9UGK3 403 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 SLC45A2Q9UMX9 530 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 PCDHA1Q9Y5I3 950 aa4.98□□□□□ -1.61
RNU6-88P-201ENST00000606801 XDHP47989 1333 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 CCDC78A2IDD5 438 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 CAPN14A8MX76 684 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 H3BUI4 141 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 KIAA0391O15091 583 aaKnown RBP4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 ARIH2O95376 493 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 MATN4O95460 622 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 AMHP03971 560 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 IL12RB1P42701 662 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 CDSNQ15517 529 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 ATXN7L2Q5T6C5 722 aaPredicted RBP4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 CHST13Q8NET6 341 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 ATXN2LQ8WWM7 1075 aaKnown RBP4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 MRGPRX1Q96LB2 322 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 SARGQ9BW04 601 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 C22orf23Q9BZE7 217 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 ZMAT3Q9HA38 289 aaKnown RBP4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 CHST12Q9NRB3 414 aa4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 VSX1Q9NZR4 365 aaPredicted RBP4.97□□□□□ -1.61
RNU6-88P-201ENST00000606801 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 PRR5-ARHGAP8B1AHC4 643 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 APAF1O14727 1248 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 IPO13O94829 963 aaKnown RBP4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 POMCP01189 267 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 AHSGP02765 367 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 FTH1P19P0C7X4 201 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 TRIM27P14373 513 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 ZNF20P17024 532 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 HDCP19113 662 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 CHN2P52757 468 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 CNN3Q15417 329 aaKnown RBP4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 DCAF17Q5H9S7 520 aaPredicted RBP4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 FAM102AQ5T9C2 384 aaPredicted RBP4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 EFCAB12Q6NXP0 572 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 ZNF585AQ6P3V2 769 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 APOA5Q6Q788 366 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 MAEAQ7L5Y9 396 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 SRGAP1Q7Z6B7 1085 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 GGNQ86UU5 652 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 ANKRD35Q8N283 1001 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 OR10H5Q8NGA6 315 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 ZFP28Q8NHY6 868 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 PGBD4Q96DM1 585 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 FAM167AQ96KS9 214 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 GPR20Q99678 358 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 WDCPQ9H6R7 721 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 MAN1C1Q9NR34 630 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 SIDT1Q9NXL6 827 aaKnown RBP4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 PCDHA6Q9UN73 950 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 HDAC5Q9UQL6 1122 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 USP19O94966 1318 aa4.96□□□□□ -1.62
RNU6-88P-201ENST00000606801 FAM227AF5H4B4 570 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 CAND2O75155 1236 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 MTHFD1P11586 935 aaKnown RBP4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 NPR1P16066 1061 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 SMARCA1P28370 1054 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 HIBADHP31937 336 aaKnown RBP4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 PHKA1P46020 1223 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 SEMA5AQ13591 1074 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 FGL2Q14314 439 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 HLTFQ14527 1009 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 RRP1BQ14684 758 aaKnown RBP4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 ZXDCQ2QGD7 858 aaPredicted RBP4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 CCDC93Q567U6 631 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 CCDC157Q569K6 752 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 RNF220Q5VTB9 566 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 MED25Q71SY5 747 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 DAAM2Q86T65 1068 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 GSPT2Q8IYD1 628 aaKnown RBP4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 IL31RAQ8NI17 732 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 ANKS1AQ92625 1134 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 DVL3Q92997 716 aaPredicted RBP4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 SLC39A13Q96H72 371 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 ADOQ96SZ5 270 aa4.95□□□□□ -1.62
RNU6-88P-201ENST00000606801 TEX101Q9BY14 249 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms