RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 CALML4Q96GE6 196 aa19.9■□□□□ 0.78
CCDC12-213ENST00000605875 PPP1R10Q96QC0 940 aaKnown RBP19.9■□□□□ 0.78
CCDC12-213ENST00000605875 HCFC1R1Q9NWW0 138 aa19.9■□□□□ 0.78
CCDC12-213ENST00000605875 DNMT3BQ9UBC3 853 aaKnown RBP19.9■□□□□ 0.78
CCDC12-213ENST00000605875 MTRRQ9UBK8 725 aa19.9■□□□□ 0.78
CCDC12-213ENST00000605875 DAXXQ9UER7 740 aaPredicted RBP19.9■□□□□ 0.78
CCDC12-213ENST00000605875 CLIC4Q9Y696 253 aa19.9■□□□□ 0.78
CCDC12-213ENST00000605875 LRRN2O75325 713 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 LONP1P36776 959 aaKnown RBP19.89■□□□□ 0.77
CCDC12-213ENST00000605875 PABPC1LQ4VXU2 614 aaKnown RBP19.89■□□□□ 0.77
CCDC12-213ENST00000605875 ZC3H14Q6PJT7 736 aaKnown RBP19.89■□□□□ 0.77
CCDC12-213ENST00000605875 GVINP1Q7Z2Y8 2422 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 APBB1IPQ7Z5R6 666 aaPredicted RBP19.89■□□□□ 0.77
CCDC12-213ENST00000605875 GPBP1Q86WP2 473 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 KCTD17Q8N5Z5 321 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 CEP120Q8N960 986 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 UROC1Q96N76 676 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 NOTCH4Q99466 2003 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 MRPL4Q9BYD3 311 aaKnown RBP19.89■□□□□ 0.77
CCDC12-213ENST00000605875 CDT1Q9H211 546 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 C17orf75Q9HAS0 396 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 MTMR6Q9Y217 621 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 TNFSF13BQ9Y275 285 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 CDY1Q9Y6F8 540 aa19.89■□□□□ 0.77
CCDC12-213ENST00000605875 CACNA1IQ9P0X4 2223 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 FANCMQ8IYD8 2048 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 KANSL1LA0AUZ9 987 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 SLC26A4O43511 780 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 TRAPPC3O43617 180 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 PLS3P13797 630 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 TKTP29401 623 aaKnown RBP19.88■□□□□ 0.77
CCDC12-213ENST00000605875 MARCKSP29966 332 aaPredicted RBP19.88■□□□□ 0.77
CCDC12-213ENST00000605875 PRKCQQ04759 706 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 DHX8Q14562 1220 aaKnown RBP19.88■□□□□ 0.77
CCDC12-213ENST00000605875 PTPAQ15257 358 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 MLF2Q15773 248 aaPredicted RBP19.88■□□□□ 0.77
CCDC12-213ENST00000605875 UPP1Q16831 310 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 SLC44A4Q53GD3 710 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 CD300LGQ6UXG3 332 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 RSPO2Q6UXX9 243 aaPredicted RBP19.88■□□□□ 0.77
CCDC12-213ENST00000605875 ANKS3Q6ZW76 656 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 RTL10Q7L3V2 364 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 ACO2Q99798 780 aaKnown RBP19.88■□□□□ 0.77
CCDC12-213ENST00000605875 KXD1Q9BQD3 176 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 TARS2Q9BW92 718 aaKnown RBP19.88■□□□□ 0.77
CCDC12-213ENST00000605875 TMEM134Q9H6X4 195 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 GOLGA2P5Q9HBQ8 144 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 KCND2Q9NZV8 630 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 KCNH3Q9ULD8 1083 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 BACE2Q9Y5Z0 518 aa19.88■□□□□ 0.77
CCDC12-213ENST00000605875 I3L4J1 428 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 HARSP12081 509 aaKnown RBP19.87■□□□□ 0.77
CCDC12-213ENST00000605875 BRCC3P46736 316 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 CEBPZQ03701 1054 aaKnown RBP19.87■□□□□ 0.77
CCDC12-213ENST00000605875 ARSHQ5FYA8 562 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 NPAS3Q8IXF0 933 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 SPIRE2Q8WWL2 714 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 ING5Q8WYH8 240 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 DDX27Q96GQ7 796 aaKnown RBP19.87■□□□□ 0.77
CCDC12-213ENST00000605875 REEP2Q9BRK0 252 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 DDX23Q9BUQ8 820 aaKnown RBP19.87■□□□□ 0.77
CCDC12-213ENST00000605875 BLOC1S4Q9NUP1 217 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 ANKFY1Q9P2R3 1169 aa19.87■□□□□ 0.77
CCDC12-213ENST00000605875 RBM19Q9Y4C8 960 aaKnown RBP19.87■□□□□ 0.77
CCDC12-213ENST00000605875 SMIM28A0A1B0GU29 152 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 YARSP54577 528 aaKnown RBP19.86■□□□□ 0.77
CCDC12-213ENST00000605875 OSTNP61366 133 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 PFKPQ01813 784 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 MCM6Q14566 821 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 UBXN2BQ14CS0 331 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 KIAA2013Q8IYS2 634 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 C3orf58Q8NDZ4 430 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 TMEM161BQ8NDZ6 487 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 RAD54LQ92698 747 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 HINFPQ9BQA5 517 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 CCDC94Q9BW85 323 aaPredicted RBP19.86■□□□□ 0.77
CCDC12-213ENST00000605875 BCO2Q9BYV7 579 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 FBXO2Q9UK22 296 aaPredicted RBP19.86■□□□□ 0.77
CCDC12-213ENST00000605875 MRPS23Q9Y3D9 190 aaKnown RBP19.86■□□□□ 0.77
CCDC12-213ENST00000605875 MTF2Q9Y483 593 aaPredicted RBP19.86■□□□□ 0.77
CCDC12-213ENST00000605875 COL4A3Q01955 1670 aa19.86■□□□□ 0.77
CCDC12-213ENST00000605875 EP300Q09472 2414 aaPredicted RBP19.86■□□□□ 0.77
CCDC12-213ENST00000605875 ABLIM1O14639 778 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 STX6O43752 255 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 MAPTP10636 758 aaKnown RBP19.85■□□□□ 0.77
CCDC12-213ENST00000605875 GRM5P41594 1212 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 SMTNP53814 917 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 SOX4Q06945 474 aaPredicted RBP19.85■□□□□ 0.77
CCDC12-213ENST00000605875 STRN3Q13033 797 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 MPZL3Q6UWV2 235 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 USP49Q70CQ1 688 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 HSCBQ8IWL3 235 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 MAML2Q8IZL2 1156 aaPredicted RBP19.85■□□□□ 0.77
CCDC12-213ENST00000605875 MCRS1Q96EZ8 462 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 PTPRHQ9HD43 1115 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 TOPORSQ9NS56 1045 aaPredicted RBP19.85■□□□□ 0.77
CCDC12-213ENST00000605875 SPATA6Q9NWH7 488 aaPredicted RBP19.85■□□□□ 0.77
CCDC12-213ENST00000605875 ODF2LQ9ULJ1 636 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 CITO14578 2027 aa19.85■□□□□ 0.77
CCDC12-213ENST00000605875 FAM170BA6NMN3 283 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms