RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 VPS41P49754 854 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 IFI35P80217 286 aaPredicted RBP12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 DENND2CQ68D51 928 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 TRIM50Q86XT4 487 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MORC4Q8TE76 937 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 USTQ9Y2C2 406 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 R3HDM2Q9Y2K5 976 aaKnown RBP12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ARID2Q68CP9 1835 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 A6NNZ2 444 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ARL2P36404 184 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CLDN10P78369 228 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CUL2Q13617 745 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 LY6KQ17RY6 165 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 TUBB8Q3ZCM7 444 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ZNF394Q53GI3 561 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 APOBEC3FQ8IUX4 373 aaKnown RBP12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 TP73O15350 636 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 USP2O75604 605 aaPredicted RBP12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SSR1P43307 286 aaKnown RBP12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CAPSQ13938 189 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 VGLL4Q14135 290 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CLUL1Q15846 466 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 AGBL2Q5U5Z8 902 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ENOSF1Q7L5Y1 443 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PRUNE1Q86TP1 453 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ARFGAP2Q8N6H7 521 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 EPS8L3Q8TE67 593 aaKnown RBP12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ZBTB10Q96DT7 871 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PWWP2AQ96N64 755 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CEP89Q96ST8 783 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 TCHPQ9BT92 498 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PAGR1Q9BTK6 254 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 STYXL1Q9Y6J8 313 aa12.58□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SSC5DA1L4H1 1573 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 A0A0B4J269 797 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 FARP2O94887 1054 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ATG7O95352 703 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ECEL1O95672 775 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SRGAP2CP0DJJ0 459 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 GNA15P30679 374 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MAGEA9P43362 315 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NAMPTP43490 491 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NOP14P78316 857 aaKnown RBP12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KRT17Q04695 432 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PDE4CQ08493 712 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 QPCTQ16769 361 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MMS22LQ6ZRQ5 1243 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ANKS1BQ7Z6G8 1248 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CDR2LQ86X02 465 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CCDC50Q8IVM0 306 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PRPF31Q8WWY3 499 aaKnown RBP12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 DDX23Q9BUQ8 820 aaKnown RBP12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 AZI2Q9H6S1 392 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KLHL11Q9NVR0 708 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 GPRC5DQ9NZD1 345 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 FSCN2O14926 492 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ZC3H11AO75152 810 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 GGPS1O95749 300 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CYP1A1P04798 512 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CD58P19256 250 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TAS2R40P59535 323 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ATP13A4Q4VNC1 1196 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MON1BQ7L1V2 547 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LRRC71Q8N4P6 559 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RAPGEF5Q92565 580 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KIAA1586Q9HCI6 787 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ADAM22Q9P0K1 906 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CNTNAP2Q9UHC6 1331 aa12.58□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LCTP09848 1927 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SOWAHBA6NEL2 793 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 THAP12O43422 761 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 STAM2O75886 525 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 FAM107AO95990 144 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PGK2P07205 417 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 GJB1P08034 283 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RALAP11233 206 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TCF4P15884 667 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 STAT5BP51692 787 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CENPCQ03188 943 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NCOA4Q13772 614 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CCDC38Q502W7 563 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MICALL1Q8N3F8 863 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TMEM130Q8N3G9 435 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RBBP8NLQ8NC74 664 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ART4Q93070 314 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LRRC19Q9H756 370 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MTRF1LQ9UGC7 380 aaKnown RBP12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ASIC3Q9UHC3 531 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 GMNCA6NCL1 334 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms