RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 USP17L20D6RJB6 530 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L24Q0WX57 530 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 SFSWAPQ12872 951 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KBTBD12Q3ZCT8 623 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L6PQ6QN14 398 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 NYAP1Q6ZVC0 841 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 NARS2Q96I59 477 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 C20orf96Q9NUD7 363 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 ADCY10Q96PN6 1610 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 CAV1Q03135 178 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 MTMR1Q13613 665 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 IYDQ6PHW0 289 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 MICU2Q8IYU8 434 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 PPHLN1Q8NEY8 458 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 DDI1Q8WTU0 396 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 DCAF4Q8WV16 495 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 VPS50Q96JG6 964 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 CPVLQ9H3G5 476 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 HSPBP1Q9NZL4 362 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 DDX20Q9UHI6 824 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 FAM47DPA6NHR8 397 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 H2AFXP16104 143 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 PSMC6P62333 389 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 SLC20A2Q08357 652 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 CCDC60Q8IWA6 550 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 SLC25A41Q8N5S1 370 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 LRRC39Q96DD0 335 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 PAIP1Q9H074 479 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 CYP26B1Q9NR63 512 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 SOX13Q9UN79 622 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 ARHGEF37A1IGU5 675 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 MIF4GDA9UHW6 222 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 SLC16A4O15374 487 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 PPARGP37231 505 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 MCRS1Q96EZ8 462 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 RMDN3Q96TC7 470 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KLHL4Q9C0H6 718 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 TTC26A0AVF1 554 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 M0QYV0 167 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KRT76Q01546 638 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 R3HDM1Q15032 1099 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 IMPG1Q17R60 797 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 FAM83BQ5T0W9 1011 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 IZUMO3Q5VZ72 239 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KDM7AQ6ZMT4 941 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 MRPS26Q9BYN8 205 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KLHL31Q9H511 634 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 MAGI3Q5TCQ9 1506 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 CFAP99D6REC4 459 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 GPC5P78333 572 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 RNF19BQ6ZMZ0 732 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 RAD54LQ92698 747 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 MTERF3Q96E29 417 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 METTL5Q9NRN9 209 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 LIMA1Q9UHB6 759 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 POLIQ9UNA4 740 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 DIS3Q9Y2L1 958 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 SEMA3DO95025 777 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 PYGLP06737 847 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 AKR1B1P15121 316 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 USP6P35125 1406 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 P3H1Q32P28 736 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 RNF219Q5W0B1 726 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 XXYLT1Q8NBI6 393 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 MMTAG2Q9BU76 263 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 RANBP17Q9H2T7 1088 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 DKK3Q9UBP4 350 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 PYGMP11217 842 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 ROR1Q01973 937 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 ITIH4Q14624 930 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 TBCCQ15814 346 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 PREPLQ4J6C6 727 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 C11orf74Q86VG3 221 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 DDIASQ8IXT1 998 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 DIS3LQ8TF46 1054 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 WDR60Q8WVS4 1066 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 TFR2Q9UP52 801 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 AATKQ6ZMQ8 1374 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 FOXN1O15353 648 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 PEX5P50542 639 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 DSTYKQ6XUX3 929 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 SCG3Q8WXD2 468 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 KLHL11Q9NVR0 708 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 SUPT20HL1Q3ZLR7 823 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 KIAA1755Q5JYT7 1200 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 FAM196AQ6ZSG2 479 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 TTC30AQ86WT1 665 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 CLEC4FQ8N1N0 589 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 NLGN1Q8N2Q7 840 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 UBASH3BQ8TF42 649 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 AFG1LQ8WV93 481 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 ZBTB5O15062 677 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 RAD51CO43502 376 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms