RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 SMIM28A0A1B0GU29 152 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 ZC3H11AO75152 810 aaKnown RBP eCLIP18.83■□□□□ 0.61
DDX49-213ENST00000602113 CLTBP09497 229 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 ITGA4P13612 1032 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 KCNE1P15382 129 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 HNRNPH3P31942 346 aaKnown RBP18.83■□□□□ 0.61
DDX49-213ENST00000602113 RAB27AP51159 221 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 MYL6P60660 151 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 RAPGEF1Q13905 1077 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 TCTN1Q2MV58 587 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 GLRA4Q5JXX5 417 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 SPOPLQ6IQ16 392 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 AGMOQ6ZNB7 445 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 DBF4BQ8NFT6 615 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 KREMEN1Q96MU8 473 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 NT5C1BQ96P26 610 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 GPR88Q9GZN0 384 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 APOBEC3GQ9HC16 384 aaKnown RBP18.83■□□□□ 0.61
DDX49-213ENST00000602113 TMEM39AQ9NV64 488 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 PYCARDQ9ULZ3 195 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 PLAGL2Q9UPG8 496 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 RALGAPA2Q2PPJ7 1873 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 CITO14578 2027 aa18.83■□□□□ 0.61
DDX49-213ENST00000602113 RFX1P22670 979 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 MEA1Q16626 185 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 CCDC112Q8NEF3 446 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 C18orf25Q96B23 403 aaPredicted RBP18.82■□□□□ 0.6
DDX49-213ENST00000602113 ZFP42Q96MM3 310 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 STK33Q9BYT3 514 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 XYLT2Q9H1B5 865 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 DPP3Q9NY33 737 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 TUBGCP4Q9UGJ1 667 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 DAAM1Q9Y4D1 1078 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 C9IYK1 514 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 PTGESO14684 152 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 ASS1P00966 412 aaKnown RBP18.82■□□□□ 0.6
DDX49-213ENST00000602113 ITGB3P05106 788 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 PNMA6AP0CW24 399 aaPredicted RBP18.82■□□□□ 0.6
DDX49-213ENST00000602113 TRPC3Q13507 836 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 DRAP1Q14919 205 aaPredicted RBP18.82■□□□□ 0.6
DDX49-213ENST00000602113 ARHGAP44Q17R89 818 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 WDR44Q5JSH3 913 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 ZNF598Q86UK7 904 aaKnown RBP18.82■□□□□ 0.6
DDX49-213ENST00000602113 ECHDC2Q86YB7 292 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 HACE1Q8IYU2 909 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 PPM1KQ8N3J5 372 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 SYN2Q92777 582 aaPredicted RBP18.82■□□□□ 0.6
DDX49-213ENST00000602113 SPAG5Q96R06 1193 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 CHP1Q99653 195 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 TSPYL2Q9H2G4 693 aaPredicted RBP18.82■□□□□ 0.6
DDX49-213ENST00000602113 MYO6Q9UM54 1294 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 ZKSCAN5Q9Y2L8 839 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 NUB1Q9Y5A7 615 aa18.82■□□□□ 0.6
DDX49-213ENST00000602113 TANC1Q9C0D5 1861 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 F8VZ95 297 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 CXCL10P02778 98 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 IBSPP21815 317 aaPredicted RBP18.81■□□□□ 0.6
DDX49-213ENST00000602113 AFF1P51825 1210 aaKnown RBP18.81■□□□□ 0.6
DDX49-213ENST00000602113 TSR1Q2NL82 804 aaKnown RBP18.81■□□□□ 0.6
DDX49-213ENST00000602113 SFMBT2Q5VUG0 894 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 RNF169Q8NCN4 708 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 GSTCDQ8NEC7 633 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 SEPT8Q92599 483 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 GAD1Q99259 594 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 FTHL17Q9BXU8 183 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 NUCKS1Q9H1E3 243 aaKnown RBP18.81■□□□□ 0.6
DDX49-213ENST00000602113 C1orf112Q9NSG2 853 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 AIPL1Q9NZN9 384 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 ITGA11Q9UKX5 1188 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 GIT1Q9Y2X7 761 aa18.81■□□□□ 0.6
DDX49-213ENST00000602113 SOWAHDA6NJG2 315 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 KRT19P08727 400 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 SKIP12755 728 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 POLR2BP30876 1174 aaKnown RBP18.8■□□□□ 0.6
DDX49-213ENST00000602113 MLH1P40692 756 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 NOP14P78316 857 aaKnown RBP18.8■□□□□ 0.6
DDX49-213ENST00000602113 FAM189BP81408 668 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 SGSM1Q2NKQ1 1148 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 SLC24A5Q71RS6 500 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 VWCEQ96DN2 955 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 TSPAN18Q96SJ8 248 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 ARID3AQ99856 593 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 TRIP11Q15643 1979 aa18.8■□□□□ 0.6
DDX49-213ENST00000602113 TRIM43BA6NCK2 446 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 ARL5CA6NH57 179 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 FOXN3O00409 490 aaPredicted RBP18.79■□□□□ 0.6
DDX49-213ENST00000602113 PARNO95453 639 aaKnown RBP18.79■□□□□ 0.6
DDX49-213ENST00000602113 ITGB8P26012 769 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 MFAP3P55082 362 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 GCNT1Q02742 428 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 SOX4Q06945 474 aaPredicted RBP18.79■□□□□ 0.6
DDX49-213ENST00000602113 MTF1Q14872 753 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 HGSNATQ68CP4 663 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 IRF2BP2Q7Z5L9 587 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 TMTC1Q8IUR5 882 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 BEST2Q8NFU1 509 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 TRIM43Q96BQ3 446 aaPredicted RBP18.79■□□□□ 0.6
DDX49-213ENST00000602113 PGBD4Q96DM1 585 aa18.79■□□□□ 0.6
DDX49-213ENST00000602113 PPP1R10Q96QC0 940 aaKnown RBP18.79■□□□□ 0.6
DDX49-213ENST00000602113 ZNHIT6Q9NWK9 470 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms