RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 K7ESF4 209 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 ARNTLO00327 626 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 TM4SF5O14894 197 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 USO1O60763 962 aaKnown RBP17.69■□□□□ 0.42
SSBP4-211ENST00000601614 MOSPD3O75425 235 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 B3GAT3O94766 335 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 SEC24AO95486 1093 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 PPP2R5DQ14738 602 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 FAM187BQ17R55 369 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.69■□□□□ 0.42
SSBP4-211ENST00000601614 ZNF461Q8TAF7 563 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 IRF7Q92985 503 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 PRIMPOLQ96LW4 560 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 TRPV5Q9NQA5 729 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 RXFP3Q9NSD7 469 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 PRMT7Q9NVM4 692 aaPredicted RBP17.69■□□□□ 0.42
SSBP4-211ENST00000601614 GDAQ9Y2T3 454 aa17.69■□□□□ 0.42
SSBP4-211ENST00000601614 MARCH6O60337 910 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 ABLIM3O94929 683 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 LRG1P02750 347 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 PSMC3P17980 439 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 CCNE1P24864 410 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 VIPR2P41587 438 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 HEATR6Q6AI08 1181 aaKnown RBP17.68■□□□□ 0.42
SSBP4-211ENST00000601614 SLC8B1Q6J4K2 584 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 Q6ZS52 159 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 ANKS3Q6ZW76 656 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 HS6ST3Q8IZP7 471 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 FAM160A2Q8N612 972 aaPredicted RBP17.68■□□□□ 0.42
SSBP4-211ENST00000601614 BSNDQ8WZ55 320 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 PPP1R10Q96QC0 940 aaKnown RBP17.68■□□□□ 0.42
SSBP4-211ENST00000601614 CEP295Q9C0D2 2601 aa17.68■□□□□ 0.42
SSBP4-211ENST00000601614 ATG2BQ96BY7 2078 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 N4BP3O15049 544 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 CDC45O75419 566 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 GJA1P17302 382 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
SSBP4-211ENST00000601614 SOX4Q06945 474 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-211ENST00000601614 PTGDRQ13258 359 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 SF3A2Q15428 464 aaKnown RBP17.67■□□□□ 0.42
SSBP4-211ENST00000601614 UPP1Q16831 310 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 FAM177A1Q8N128 213 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-211ENST00000601614 SMARCD2Q92925 531 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 RSPRY1Q96DX4 576 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 CITO14578 2027 aa17.67■□□□□ 0.42
SSBP4-211ENST00000601614 CPLX1O14810 134 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 SOX9P48436 509 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 SHC2P98077 582 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 STK3Q13188 491 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 CCDC6Q16204 474 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 LONP2Q86WA8 852 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 SLFN12Q8IYM2 578 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 SPEM1Q8N4L4 309 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 CCDC113Q9H0I3 377 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 INSL5Q9Y5Q6 135 aa17.66■□□□□ 0.42
SSBP4-211ENST00000601614 WNT7AO00755 349 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 PRRG1O14668 218 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 MICAL2O94851 1124 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 PAPSS2O95340 614 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-211ENST00000601614 PRKCBP05771 671 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 HOXB3P14651 431 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-211ENST00000601614 ATF2P15336 505 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 ARPP19P56211 112 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 PRPF4BQ13523 1007 aaKnown RBP17.65■□□□□ 0.42
SSBP4-211ENST00000601614 COL9A2Q14055 689 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-211ENST00000601614 TXNDC11Q6PKC3 985 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 PDZD4Q76G19 769 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-211ENST00000601614 TCEAL8Q8IYN2 117 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 CYP4F11Q9HBI6 524 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 CEP72Q9P209 647 aa17.65■□□□□ 0.42
SSBP4-211ENST00000601614 HEPACAM2A8MVW5 462 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 ZNF197O14709 1029 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 ZNF263O14978 683 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
SSBP4-211ENST00000601614 LIG1P18858 919 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 ELF1P32519 619 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 CNR2P34972 360 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 LIMK1P53667 647 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 IL31Q6EBC2 164 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 RUFY3Q7L099 469 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 ZBTB8OSQ8IWT0 167 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 ZSCAN18Q8TBC5 510 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-211ENST00000601614 DEPDC1BQ8WUY9 529 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 DDX1Q92499 740 aaKnown RBP17.64■□□□□ 0.41
SSBP4-211ENST00000601614 ZNF274Q96GC6 653 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-211ENST00000601614 CCDC43Q96MW1 224 aaKnown RBP17.64■□□□□ 0.41
SSBP4-211ENST00000601614 PCDHA12Q9UN75 941 aa17.64■□□□□ 0.41
SSBP4-211ENST00000601614 NUP210Q8TEM1 1887 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-211ENST00000601614 ZFYVE26Q68DK2 2539 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 SLC38A8A6NNN8 435 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 ACKR2O00590 384 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 SPATA31C1P0DKV0 1188 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 PSMA5P28066 241 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 NR5A1Q13285 461 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 TEAD2Q15562 447 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 MAPK6Q16659 721 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 TMEM132AQ24JP5 1023 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 AASDHQ4L235 1098 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-211ENST00000601614 MFSD6LQ8IWD5 586 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 CEP120Q8N960 986 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms