RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TKTP29401 623 aaKnown RBP15.03■□□□□ -0
IRF3-225ENST00000600022 SOX4Q06945 474 aaPredicted RBP15.03■□□□□ -0
IRF3-225ENST00000600022 RAB33AQ14088 237 aa15.03■□□□□ -0
IRF3-225ENST00000600022 MAPK6Q16659 721 aa15.03■□□□□ -0
IRF3-225ENST00000600022 SLC5A9Q2M3M2 681 aa15.03■□□□□ -0
IRF3-225ENST00000600022 SLC44A4Q53GD3 710 aa15.03■□□□□ -0
IRF3-225ENST00000600022 LIN9Q5TKA1 542 aa15.03■□□□□ -0
IRF3-225ENST00000600022 CCDC73Q6ZRK6 1079 aa15.03■□□□□ -0
IRF3-225ENST00000600022 ZBTB8OSQ8IWT0 167 aa15.03■□□□□ -0
IRF3-225ENST00000600022 MCPH1Q8NEM0 835 aa15.03■□□□□ -0
IRF3-225ENST00000600022 MCRS1Q96EZ8 462 aa15.03■□□□□ -0
IRF3-225ENST00000600022 PPP1R10Q96QC0 940 aaKnown RBP15.03■□□□□ -0
IRF3-225ENST00000600022 POLR3CQ9BUI4 534 aaPredicted RBP15.03■□□□□ -0
IRF3-225ENST00000600022 CDY1Q9Y6F8 540 aa15.03■□□□□ -0
IRF3-225ENST00000600022 CEP250Q9BV73 2442 aa15.02■□□□□ -0
IRF3-225ENST00000600022 MED19A0JLT2 244 aaPredicted RBP15.02■□□□□ -0
IRF3-225ENST00000600022 SHISA7A6NL88 538 aa15.02■□□□□ -0
IRF3-225ENST00000600022 MEFVO15553 781 aaPredicted RBP15.02■□□□□ -0
IRF3-225ENST00000600022 B3GAT3O94766 335 aa15.02■□□□□ -0
IRF3-225ENST00000600022 HNRNPA1P09651 372 aaKnown RBP eCLIP15.02■□□□□ -0
IRF3-225ENST00000600022 RPA1P27694 616 aa15.02■□□□□ -0
IRF3-225ENST00000600022 OSTNP61366 133 aa15.02■□□□□ -0
IRF3-225ENST00000600022 ATP2C1P98194 919 aaPredicted RBP15.02■□□□□ -0
IRF3-225ENST00000600022 FOXK2Q01167 660 aa15.02■□□□□ -0
IRF3-225ENST00000600022 CREMQ03060 361 aa15.02■□□□□ -0
IRF3-225ENST00000600022 UPP1Q16831 310 aa15.02■□□□□ -0
IRF3-225ENST00000600022 CCDC183Q5T5S1 534 aa15.02■□□□□ -0
IRF3-225ENST00000600022 NPAS3Q8IXF0 933 aa15.02■□□□□ -0
IRF3-225ENST00000600022 C4orf32Q8N8J7 132 aa15.02■□□□□ -0
IRF3-225ENST00000600022 SUMF1Q8NBK3 374 aa15.02■□□□□ -0
IRF3-225ENST00000600022 DEPTORQ8TB45 409 aa15.02■□□□□ -0
IRF3-225ENST00000600022 DDX23Q9BUQ8 820 aaKnown RBP15.02■□□□□ -0
IRF3-225ENST00000600022 ZMYM2Q9UBW7 1377 aa15.01□□□□□ -0.01
IRF3-225ENST00000600022 KANSL1LA0AUZ9 987 aa15.01□□□□□ -0.01
IRF3-225ENST00000600022 ARHGEF35A5YM69 484 aa15.01□□□□□ -0.01
IRF3-225ENST00000600022 FAM170BA6NMN3 283 aa15.01□□□□□ -0.01
IRF3-225ENST00000600022 NAMPTP43490 491 aa15.01□□□□□ -0.01
IRF3-225ENST00000600022 DDX27Q96GQ7 796 aaKnown RBP15.01□□□□□ -0.01
IRF3-225ENST00000600022 ZMAT2Q96NC0 199 aaKnown RBP15.01□□□□□ -0.01
IRF3-225ENST00000600022 C2orf40Q9H1Z8 148 aa15.01□□□□□ -0.01
IRF3-225ENST00000600022 MTRRQ9UBK8 725 aa15.01□□□□□ -0.01
IRF3-225ENST00000600022 ZFP37Q9Y6Q3 630 aaPredicted RBP15.01□□□□□ -0.01
IRF3-225ENST00000600022 NCOR2Q9Y618 2525 aa15.01□□□□□ -0.01
IRF3-225ENST00000600022 SMIM28A0A1B0GU29 152 aa15□□□□□ -0.01
IRF3-225ENST00000600022 A0A1W2PQ27 194 aa15□□□□□ -0.01
IRF3-225ENST00000600022 A0A1W2PQ64 194 aa15□□□□□ -0.01
IRF3-225ENST00000600022 A0A1W2PQD8 194 aa15□□□□□ -0.01
IRF3-225ENST00000600022 LAD1O00515 517 aa15□□□□□ -0.01
IRF3-225ENST00000600022 FZD5Q13467 585 aa15□□□□□ -0.01
IRF3-225ENST00000600022 UBXN2BQ14CS0 331 aa15□□□□□ -0.01
IRF3-225ENST00000600022 MLF2Q15773 248 aaPredicted RBP15□□□□□ -0.01
IRF3-225ENST00000600022 PABPC1LQ4VXU2 614 aaKnown RBP15□□□□□ -0.01
IRF3-225ENST00000600022 ATF7IP2Q5U623 682 aa15□□□□□ -0.01
IRF3-225ENST00000600022 ADALQ6DHV7 355 aa15□□□□□ -0.01
IRF3-225ENST00000600022 TANGO2Q6ICL3 276 aa15□□□□□ -0.01
IRF3-225ENST00000600022 TSSK4Q6SA08 328 aa15□□□□□ -0.01
IRF3-225ENST00000600022 PDZRN4Q6ZMN7 1036 aaPredicted RBP15□□□□□ -0.01
IRF3-225ENST00000600022 TAS1R3Q7RTX0 852 aa15□□□□□ -0.01
IRF3-225ENST00000600022 ERMP1Q7Z2K6 904 aa15□□□□□ -0.01
IRF3-225ENST00000600022 DAW1Q8N136 415 aa15□□□□□ -0.01
IRF3-225ENST00000600022 TCEAL4Q96EI5 215 aa15□□□□□ -0.01
IRF3-225ENST00000600022 BHMT2Q9H2M3 363 aa15□□□□□ -0.01
IRF3-225ENST00000600022 DDX19AQ9NUU7 478 aaKnown RBP15□□□□□ -0.01
IRF3-225ENST00000600022 SPATA6Q9NWH7 488 aaPredicted RBP15□□□□□ -0.01
IRF3-225ENST00000600022 FBXO2Q9UK22 296 aaPredicted RBP15□□□□□ -0.01
IRF3-225ENST00000600022 PCDHA7Q9UN72 937 aa15□□□□□ -0.01
IRF3-225ENST00000600022 TRIP11Q15643 1979 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 PP2D1A8MPX8 630 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 XYLBO75191 536 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 SEC24AO95486 1093 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 RHOP08100 348 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 OR52Z1P0C646 297 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 CEBPBP17676 345 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 HOXA9P31269 272 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 PRPHP41219 470 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 ARPP19P56211 112 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 ARL6IP4Q66PJ3 421 aaKnown RBP14.99□□□□□ -0.01
IRF3-225ENST00000600022 ALKAL1Q6UXT8 129 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 KRI1Q8N9T8 703 aaKnown RBP14.99□□□□□ -0.01
IRF3-225ENST00000600022 C18orf25Q96B23 403 aaPredicted RBP14.99□□□□□ -0.01
IRF3-225ENST00000600022 ZBTB45Q96K62 511 aaPredicted RBP14.99□□□□□ -0.01
IRF3-225ENST00000600022 ADPGKQ9BRR6 497 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 CDT1Q9H211 546 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 SEMA4AQ9H3S1 761 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 PTPRHQ9HD43 1115 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 KIAA1024Q9UPX6 916 aa14.99□□□□□ -0.01
IRF3-225ENST00000600022 MRPS23Q9Y3D9 190 aaKnown RBP14.99□□□□□ -0.01
IRF3-225ENST00000600022 WDR27A2RRH5 827 aa14.98□□□□□ -0.01
IRF3-225ENST00000600022 SFI1A8K8P3 1242 aa14.98□□□□□ -0.01
IRF3-225ENST00000600022 E9PMD0 336 aa14.98□□□□□ -0.01
IRF3-225ENST00000600022 TMEM189-UBE2V1I3L0A0 370 aa14.98□□□□□ -0.01
IRF3-225ENST00000600022 KINO60870 393 aaKnown RBP14.98□□□□□ -0.01
IRF3-225ENST00000600022 CUTAO60888 179 aa14.98□□□□□ -0.01
IRF3-225ENST00000600022 TARSP26639 723 aaKnown RBP14.98□□□□□ -0.01
IRF3-225ENST00000600022 MARCKSP29966 332 aaPredicted RBP14.98□□□□□ -0.01
IRF3-225ENST00000600022 CDC25AP30304 524 aa14.98□□□□□ -0.01
IRF3-225ENST00000600022 CCT6AP40227 531 aaKnown RBP14.98□□□□□ -0.01
IRF3-225ENST00000600022 CCR2P41597 374 aa14.98□□□□□ -0.01
IRF3-225ENST00000600022 ROR1Q01973 937 aa14.98□□□□□ -0.01
IRF3-225ENST00000600022 CSTF1Q05048 431 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms