RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 RTP2Q5QGT7 225 aa30.64■■■□□ 2.5
SSBP4-206ENST00000599699 SMRP1Q8NCR6 262 aa30.64■■■□□ 2.5
SSBP4-206ENST00000599699 C3orf58Q8NDZ4 430 aa30.64■■■□□ 2.5
SSBP4-206ENST00000599699 SAAL1Q96ER3 474 aa30.64■■■□□ 2.5
SSBP4-206ENST00000599699 FAM213AQ9BRX8 229 aa30.64■■■□□ 2.5
SSBP4-206ENST00000599699 SLC39A2Q9NP94 309 aa30.64■■■□□ 2.5
SSBP4-206ENST00000599699 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP30.64■■■□□ 2.5
SSBP4-206ENST00000599699 EXOC1Q9NV70 894 aa30.64■■■□□ 2.5
SSBP4-206ENST00000599699 UBQLN1Q9UMX0 589 aaKnown RBP30.64■■■□□ 2.5
SSBP4-206ENST00000599699 NUB1Q9Y5A7 615 aa30.64■■■□□ 2.5
SSBP4-206ENST00000599699 GARTP22102 1010 aa30.63■■■□□ 2.49
SSBP4-206ENST00000599699 CREMQ03060 361 aa30.63■■■□□ 2.49
SSBP4-206ENST00000599699 JADE1Q6IE81 842 aa30.63■■■□□ 2.49
SSBP4-206ENST00000599699 ARMCX5Q6P1M9 558 aa30.63■■■□□ 2.49
SSBP4-206ENST00000599699 PRSS55Q6UWB4 352 aaPredicted RBP30.63■■■□□ 2.49
SSBP4-206ENST00000599699 SLC22A17Q8WUG5 538 aa30.63■■■□□ 2.49
SSBP4-206ENST00000599699 TSPAN18Q96SJ8 248 aa30.63■■■□□ 2.49
SSBP4-206ENST00000599699 PCIF1Q9H4Z3 704 aa30.63■■■□□ 2.49
SSBP4-206ENST00000599699 RXFP1Q9HBX9 757 aa30.63■■■□□ 2.49
SSBP4-206ENST00000599699 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.63■■■□□ 2.49
SSBP4-206ENST00000599699 I3L4J1 428 aa30.62■■■□□ 2.49
SSBP4-206ENST00000599699 HOXB8P17481 243 aaPredicted RBP30.62■■■□□ 2.49
SSBP4-206ENST00000599699 BRCC3P46736 316 aa30.62■■■□□ 2.49
SSBP4-206ENST00000599699 CLCN4P51793 760 aa30.62■■■□□ 2.49
SSBP4-206ENST00000599699 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.62■■■□□ 2.49
SSBP4-206ENST00000599699 EPM2AIP1Q7L775 607 aaPredicted RBP30.62■■■□□ 2.49
SSBP4-206ENST00000599699 GLYCTKQ8IVS8 523 aa30.62■■■□□ 2.49
SSBP4-206ENST00000599699 GPR65Q8IYL9 337 aa30.62■■■□□ 2.49
SSBP4-206ENST00000599699 CBWD1Q9BRT8 395 aa30.62■■■□□ 2.49
SSBP4-206ENST00000599699 DZANK1Q9NVP4 752 aa30.62■■■□□ 2.49
SSBP4-206ENST00000599699 TTC28Q96AY4 2481 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 ZNF202O95125 648 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 LDHAP00338 332 aaKnown RBP30.61■■■□□ 2.49
SSBP4-206ENST00000599699 MYL1P05976 194 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 ADRB2P07550 413 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 RPL17P18621 184 aaKnown RBP30.61■■■□□ 2.49
SSBP4-206ENST00000599699 EHHADHQ08426 723 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 TMEM132DQ14C87 1099 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 SYCE2Q6PIF2 218 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 CD300LGQ6UXG3 332 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 NELFCDQ8IXH7 590 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 BEST2Q8NFU1 509 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 ZNF507Q8TCN5 953 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 ASB7Q9H672 318 aa30.61■■■□□ 2.49
SSBP4-206ENST00000599699 USP15Q9Y4E8 981 aaPredicted RBP30.61■■■□□ 2.49
SSBP4-206ENST00000599699 GOLGA8IPA6NC78 632 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 GOLGA8JA6NMD2 632 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 UBE4BO95155 1302 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 CYP3A5P20815 502 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 GUCY2FP51841 1108 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 SMAD2Q15796 467 aaKnown RBP30.6■■■□□ 2.49
SSBP4-206ENST00000599699 ZBTB6Q15916 424 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 PSMD5Q16401 504 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 PDXDC1Q6P996 788 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 CRELD2Q6UXH1 353 aaPredicted RBP30.6■■■□□ 2.49
SSBP4-206ENST00000599699 KRBA2Q6ZNG9 492 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 PALB2Q86YC2 1186 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 TMEM130Q8N3G9 435 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 PIK3R5Q8WYR1 880 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 FBXL18Q96ME1 805 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 FNIP2Q9P278 1114 aa30.6■■■□□ 2.49
SSBP4-206ENST00000599699 CUL9Q8IWT3 2517 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 KLRC4O43908 158 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 IL18RAPO95256 599 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 GLUD1P00367 558 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 NFICP08651 508 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 MCM4P33991 863 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 HOXD13P35453 343 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 POU5F1Q01860 360 aaKnown RBP30.59■■■□□ 2.49
SSBP4-206ENST00000599699 KMT5BQ4FZB7 885 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 ZSWIM2Q8NEG5 633 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 SCFD1Q8WVM8 642 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 CCDC34Q96HJ3 373 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 DERAQ9Y315 318 aa30.59■■■□□ 2.49
SSBP4-206ENST00000599699 EXTL3O43909 919 aa30.58■■■□□ 2.49
SSBP4-206ENST00000599699 FGFR3P22607 806 aa30.58■■■□□ 2.49
SSBP4-206ENST00000599699 TKTP29401 623 aaKnown RBP30.58■■■□□ 2.49
SSBP4-206ENST00000599699 RARS2Q5T160 578 aaKnown RBP30.58■■■□□ 2.49
SSBP4-206ENST00000599699 CES5AQ6NT32 575 aa30.58■■■□□ 2.49
SSBP4-206ENST00000599699 ELMSAN1Q6PJG2 1045 aa30.58■■■□□ 2.49
SSBP4-206ENST00000599699 C12orf76Q8N812 135 aaPredicted RBP30.58■■■□□ 2.49
SSBP4-206ENST00000599699 LNX1Q8TBB1 728 aaPredicted RBP30.58■■■□□ 2.49
SSBP4-206ENST00000599699 CCDC47Q96A33 483 aaKnown RBP30.58■■■□□ 2.49
SSBP4-206ENST00000599699 S1PR5Q9H228 398 aa30.58■■■□□ 2.49
SSBP4-206ENST00000599699 RBAKQ9NYW8 714 aaPredicted RBP30.58■■■□□ 2.49
SSBP4-206ENST00000599699 RPN1P04843 607 aaKnown RBP30.57■■■□□ 2.48
SSBP4-206ENST00000599699 PRR29P0C7W0 189 aa30.57■■■□□ 2.48
SSBP4-206ENST00000599699 LRPAP1P30533 357 aa30.57■■■□□ 2.48
SSBP4-206ENST00000599699 PSMD2Q13200 908 aa30.57■■■□□ 2.48
SSBP4-206ENST00000599699 SPATA1Q5VX52 437 aa30.57■■■□□ 2.48
SSBP4-206ENST00000599699 C2CD2Q9Y426 696 aa30.57■■■□□ 2.48
SSBP4-206ENST00000599699 KIAA0391O15091 583 aaKnown RBP30.56■■■□□ 2.48
SSBP4-206ENST00000599699 SPATA31D3P0C874 917 aa30.56■■■□□ 2.48
SSBP4-206ENST00000599699 SSTR3P32745 418 aaPredicted RBP30.56■■■□□ 2.48
SSBP4-206ENST00000599699 SPATA31D4Q6ZUB0 917 aa30.56■■■□□ 2.48
SSBP4-206ENST00000599699 HS2ST1Q7LGA3 356 aa30.56■■■□□ 2.48
SSBP4-206ENST00000599699 GPD1LQ8N335 351 aa30.56■■■□□ 2.48
SSBP4-206ENST00000599699 MAN1C1Q9NR34 630 aa30.56■■■□□ 2.48
SSBP4-206ENST00000599699 CHMP5Q9NZZ3 219 aa30.56■■■□□ 2.48
SSBP4-206ENST00000599699 PRKAG3Q9UGI9 489 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms