RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 C2orf16Q68DN1 1984 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 FAM86C2PA6NEL3 165 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 LACTBL1A8MY62 500 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 FGFR3P22607 806 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 TKTP29401 623 aaKnown RBP24.6■■□□□ 1.53
CCDC9-204ENST00000599398 ENOX2Q16206 610 aaKnown RBP24.6■■□□□ 1.53
CCDC9-204ENST00000599398 CCDC65Q8IXS2 484 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 CLSTN3Q9BQT9 956 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 PLEKHA4Q9H4M7 779 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 OLFML3Q9NRN5 406 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 FAM13BQ9NYF5 915 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 EXOC7Q9UPT5 735 aa24.6■■□□□ 1.53
CCDC9-204ENST00000599398 CCDC195A0A1B0GUA6 201 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 FAM189A1O60320 539 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 PPP1R37O75864 691 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 AMPD3Q01432 767 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 TMEM31Q5JXX7 168 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 C15orf39Q6ZRI6 1047 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 KREMEN2Q8NCW0 462 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 HDAC7Q8WUI4 952 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 ACCSQ96QU6 501 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 IKZF4Q9H2S9 585 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 AGO2Q9UKV8 859 aaKnown RBP24.59■■□□□ 1.53
CCDC9-204ENST00000599398 PCDHB13Q9Y5F0 798 aa24.59■■□□□ 1.53
CCDC9-204ENST00000599398 FRMD3A2A2Y4 597 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 POLR2DO15514 142 aaKnown RBP24.58■■□□□ 1.53
CCDC9-204ENST00000599398 RFPL2O75678 378 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 C1RP00736 705 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 MCM4P33991 863 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 ACOT2P49753 483 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 KCNA1Q09470 495 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 L1TD1Q5T7N2 865 aaKnown RBP24.58■■□□□ 1.53
CCDC9-204ENST00000599398 SYCP3Q8IZU3 236 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 CMASQ8NFW8 434 aaPredicted RBP24.58■■□□□ 1.53
CCDC9-204ENST00000599398 POMGNT1Q8WZA1 660 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 STRA6Q9BX79 667 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 KBTBD4Q9NVX7 518 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 CPSF3Q9UKF6 684 aaKnown RBP24.58■■□□□ 1.53
CCDC9-204ENST00000599398 RCOR1Q9UKL0 485 aa24.58■■□□□ 1.53
CCDC9-204ENST00000599398 UBQLN1Q9UMX0 589 aaKnown RBP24.58■■□□□ 1.53
CCDC9-204ENST00000599398 C2CD4DB7Z1M9 353 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 ADAM12O43184 909 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 XPOTO43592 962 aaKnown RBP24.57■■□□□ 1.52
CCDC9-204ENST00000599398 CASP5P51878 434 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 ASIC1P78348 528 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 ALCAMQ13740 583 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 LILRA6Q6PI73 481 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 CCDC149Q6ZUS6 474 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 ANKS3Q6ZW76 656 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 TMEM130Q8N3G9 435 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 ZDHHC9Q9Y397 364 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.57■■□□□ 1.52
CCDC9-204ENST00000599398 STYXL1Q9Y6J8 313 aa24.57■■□□□ 1.52
CCDC9-204ENST00000599398 TRIOO75962 3097 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 GPR37L1O60883 481 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 OR1D2P34982 312 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 BECN1Q14457 450 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 POSTNQ15063 836 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 LIN9Q5TKA1 542 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 RESP18Q5W5W9 173 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 CD302Q8IX05 232 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 TDRD5Q8NAT2 981 aaKnown RBP24.56■■□□□ 1.52
CCDC9-204ENST00000599398 SMG7Q92540 1137 aaKnown RBP24.56■■□□□ 1.52
CCDC9-204ENST00000599398 LRFN3Q9BTN0 628 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 FGFBP2Q9BYJ0 223 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 TRIM9Q9C026 710 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 PIDD1Q9HB75 910 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 C11orf16Q9NQ32 467 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 MTRRQ9UBK8 725 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 CDY1Q9Y6F8 540 aa24.56■■□□□ 1.52
CCDC9-204ENST00000599398 DENND4AQ7Z401 1863 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 MYO10Q9HD67 2058 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.55■■□□□ 1.52
CCDC9-204ENST00000599398 TULP1O00294 542 aaPredicted RBP24.55■■□□□ 1.52
CCDC9-204ENST00000599398 CYP3A5P20815 502 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 GUCY2FP51841 1108 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 KRT85P78386 507 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 ZBTB6Q15916 424 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 JADE1Q6IE81 842 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 MAGEF1Q9HAY2 307 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 ZDHHC7Q9NXF8 308 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 FBXW11Q9UKB1 542 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 ANK1P16157 1881 aa24.55■■□□□ 1.52
CCDC9-204ENST00000599398 SYN3O14994 580 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 PRPF6O94906 941 aaKnown RBP24.54■■□□□ 1.52
CCDC9-204ENST00000599398 ADRB2P07550 413 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 ADSSP30520 456 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 LRPAP1P30533 357 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 TMEM132DQ14C87 1099 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 VARS2Q5ST30 1063 aaKnown RBP24.54■■□□□ 1.52
CCDC9-204ENST00000599398 CYP26C1Q6V0L0 522 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 STXBP4Q6ZWJ1 553 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 BEST2Q8NFU1 509 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 CHAMP1Q96JM3 812 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 SUSD3Q96L08 255 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 SPATA32Q96LK8 384 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 TSPAN18Q96SJ8 248 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 BACE2Q9Y5Z0 518 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 TCHHQ07283 1943 aa24.54■■□□□ 1.52
CCDC9-204ENST00000599398 ZMYND10O75800 440 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms