RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 GOLGA2P5Q9HBQ8 144 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 PDE11AQ9HCR9 933 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 MARCH5Q9NX47 278 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 TMEM63CQ9P1W3 806 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 TUBGCP4Q9UGJ1 667 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 ADAM28Q9UKQ2 775 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 TRIM49BA6NDI0 452 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 PODXLO00592 558 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 GRM6O15303 877 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 LPXNO60711 386 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 TADA2AO75478 443 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 EPB41P11171 864 aaKnown RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 POU3F3P20264 500 aaPredicted RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 CASP4P49662 377 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 TFAMQ00059 246 aaKnown RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 PDE12Q6L8Q7 609 aaKnown RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 CAVIN1Q6NZI2 390 aaKnown RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 INTS8Q75QN2 995 aaKnown RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 TMEM173Q86WV6 379 aaPredicted RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 EFCAB13Q8IY85 973 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 FAM186BQ8IYM0 893 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 MRPL38Q96DV4 380 aaKnown RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 CDX2Q99626 313 aaPredicted RBP16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 CGRRF1Q99675 332 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 PAAF1Q9BRP4 392 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 TLR9Q9NR96 1032 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 DPP3Q9NY33 737 aa16.34■□□□□ 0.21
GTF2F1-206ENST00000598607 CHD7Q9P2D1 2997 aa16.33■□□□□ 0.21
GTF2F1-206ENST00000598607 SLC16A3O15427 465 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 TRAPPC3O43617 180 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 B3GAT3O94766 335 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 LETM1O95202 739 aaPredicted RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 KIF4AO95239 1232 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 FGFR1OPO95684 399 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 TNNC2P02585 160 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 DLATP10515 647 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 KRT13P13646 458 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 TNNI1P19237 187 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 PAX3P23760 479 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 AP3M2P53677 418 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 PMS1P54277 932 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 WNT7BP56706 349 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 ENPEPQ07075 957 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 DUOXA2Q1HG44 320 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 FUT10Q6P4F1 479 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 ZC3H3Q8IXZ2 948 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 TMC2Q8TDI7 906 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 MYLIPQ8WY64 445 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 CCDC127Q96BQ5 260 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 CEP63Q96MT8 703 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 GUCD1Q96NT3 240 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 INTS13Q9NVM9 706 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 CACNG4Q9UBN1 327 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 RWDD2AQ9UIY3 292 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 R3HCC1Q9Y3T6 440 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 SF3B1O75533 1304 aaKnown RBP eCLIP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 MTCL1Q9Y4B5 1905 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 PRRC2BQ5JSZ5 2229 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-206ENST00000598607 AKAP3O75969 853 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 SOD2P04179 222 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 FOSL2P15408 326 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 IGFBP4P22692 258 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 TSC2P49815 1807 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 STX17P56962 302 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 MYO7AQ13402 2215 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 DPCR1Q3MIW9 517 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 TIGD5Q53EQ6 642 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 TTI2Q6NXR4 508 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 VPS52Q8N1B4 723 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 BCL7CQ8WUZ0 217 aaPredicted RBP16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 RABGGTAQ92696 567 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 PPP2R3CQ969Q6 453 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 HERC2P3Q9BVR0 1158 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 NGRNQ9NPE2 291 aaKnown RBP16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 ENTPD7Q9NQZ7 604 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 ANO10Q9NW15 660 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 ITGA11Q9UKX5 1188 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 SSX2IPQ9Y2D8 614 aa16.32■□□□□ 0.2
GTF2F1-206ENST00000598607 ANO9A1A5B4 782 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 ERCC5P28715 1186 aaPredicted RBP16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 PNPLA4P41247 253 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 VAMP7P51809 220 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 BFSP1Q12934 665 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 ADGRE1Q14246 886 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 SMC1AQ14683 1233 aaKnown RBP16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 STX1AQ16623 288 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 USP41Q3LFD5 358 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 C9orf57Q5W0N0 161 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 TMC7Q7Z402 723 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 FILIP1Q7Z7B0 1213 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 RNF168Q8IYW5 571 aaPredicted RBP16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 CSGALNACT2Q8N6G5 542 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 MICAL1Q8TDZ2 1067 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 ZNF560Q96MR9 790 aa16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 DUSP9Q99956 384 aaKnown RBP16.31■□□□□ 0.2
GTF2F1-206ENST00000598607 TCF25Q9BQ70 676 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms