RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 SF3B1O75533 1304 aaKnown RBP eCLIP15.3■□□□□ 0.04
XRCC1-207ENST00000598165 B3GAT3O94766 335 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 NR3C1P04150 777 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 SOD2P04179 222 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 NFICP08651 508 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 MRPS5P82675 430 aaKnown RBP15.3■□□□□ 0.04
XRCC1-207ENST00000598165 STIM1Q13586 685 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 MYBPC2Q14324 1141 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 SURF1Q15526 300 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 TRIP11Q15643 1979 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 SPATA1Q5VX52 437 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 PLPP4Q5VZY2 271 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 FUT10Q6P4F1 479 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 NT5DC4Q86YG4 428 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 SLC9A9Q8IVB4 645 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 GPT2Q8TD30 523 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 HASPINQ8TF76 798 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 TMEM174Q8WUU8 243 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 PPP2R3CQ969Q6 453 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 UHRF1Q96T88 793 aaPredicted RBP15.3■□□□□ 0.04
XRCC1-207ENST00000598165 VN1R3Q9BXE9 311 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 ZBP1Q9H171 429 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 BDP1A6H8Y1 2624 aa15.3■□□□□ 0.04
XRCC1-207ENST00000598165 PLXNA4Q9HCM2 1894 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 MBD3O95983 291 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 CTSAP10619 480 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 LRPAP1P30533 357 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 CA8P35219 290 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 PPP1R2P41236 205 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 ELAVL2Q12926 359 aaKnown RBP15.29■□□□□ 0.04
XRCC1-207ENST00000598165 MORC3Q14149 939 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
XRCC1-207ENST00000598165 NFIL3Q16649 462 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 TCEAL5Q5H9L2 206 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 EFCAB13Q8IY85 973 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 ADSSL1Q8N142 457 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 TRIML1Q8N9V2 468 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 CACTINQ8WUQ7 758 aaKnown RBP15.29■□□□□ 0.04
XRCC1-207ENST00000598165 HERC2P3Q9BVR0 1158 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 GPR62Q9BZJ7 368 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 PDE11AQ9HCR9 933 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 DMAC2Q9NW81 257 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 NUB1Q9Y5A7 615 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 PCDHGC5Q9Y5F6 944 aa15.29■□□□□ 0.04
XRCC1-207ENST00000598165 MYO7AQ13402 2215 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 PSMA7O14818 248 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 TRAPPC3O43617 180 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 CXCL14O95715 111 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 EFEMP2O95967 443 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 URODP06132 367 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 NR2F2P24468 414 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 RPL13P26373 211 aaKnown RBP15.28■□□□□ 0.04
XRCC1-207ENST00000598165 MCM4P33991 863 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 GUCY2FP51841 1108 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 WNT7BP56706 349 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 TFAMQ00059 246 aaKnown RBP15.28■□□□□ 0.04
XRCC1-207ENST00000598165 CYP24A1Q07973 514 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 SKIV2LQ15477 1246 aaKnown RBP15.28■□□□□ 0.04
XRCC1-207ENST00000598165 USP41Q3LFD5 358 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 CEP135Q66GS9 1140 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 KIAA1841Q6NSI8 718 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 TAS1R1Q7RTX1 841 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 RNF168Q8IYW5 571 aaPredicted RBP15.28■□□□□ 0.04
XRCC1-207ENST00000598165 MRPL43Q8N983 215 aaKnown RBP15.28■□□□□ 0.04
XRCC1-207ENST00000598165 C3orf58Q8NDZ4 430 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 NECAB3Q96P71 396 aaPredicted RBP15.28■□□□□ 0.04
XRCC1-207ENST00000598165 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 TSG101Q99816 390 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 MRPL17Q9NRX2 175 aaKnown RBP15.28■□□□□ 0.04
XRCC1-207ENST00000598165 DPP3Q9NY33 737 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 SSX2IPQ9Y2D8 614 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
XRCC1-207ENST00000598165 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
XRCC1-207ENST00000598165 HIDE1A8MVS5 230 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 BMP6P22004 513 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 GLUD2P49448 558 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 ADAM9Q13443 819 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 PSMD6Q15008 389 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 EDRF1Q3B7T1 1238 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 ZCWPW2Q504Y3 356 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 FAM171A1Q5VUB5 890 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 CENPPQ6IPU0 288 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 CD300LGQ6UXG3 332 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 ADGRD2Q7Z7M1 963 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 RBM23Q86U06 439 aaKnown RBP15.27■□□□□ 0.04
XRCC1-207ENST00000598165 TMEM130Q8N3G9 435 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 AUTS2Q8WXX7 1259 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 CCDC127Q96BQ5 260 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.04
XRCC1-207ENST00000598165 MFSD14AQ96MC6 490 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 TLE6Q9H808 572 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 IRAK3Q9Y616 596 aa15.27■□□□□ 0.04
XRCC1-207ENST00000598165 TRANK1O15050 2925 aa15.27■□□□□ 0.03
XRCC1-207ENST00000598165 C2orf71A6NGG8 1288 aa15.26■□□□□ 0.03
XRCC1-207ENST00000598165 C2CD2LO14523 706 aa15.26■□□□□ 0.03
XRCC1-207ENST00000598165 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
XRCC1-207ENST00000598165 DLATP10515 647 aaKnown RBP15.26■□□□□ 0.03
XRCC1-207ENST00000598165 CD44P16070 742 aaKnown RBP15.26■□□□□ 0.03
XRCC1-207ENST00000598165 TNNI1P19237 187 aa15.26■□□□□ 0.03
XRCC1-207ENST00000598165 IGFBP6P24592 240 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms