RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 PARD6AQ9NPB6 346 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 CFAP47Q6ZTR5 3102 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 ARHGEF37A1IGU5 675 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 K7ELQ4 463 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 TBC1D4O60343 1298 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 ABLIM3O94929 683 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 SEC24AO95486 1093 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 CCR2P41597 374 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 NAMPTP43490 491 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 FOSBP53539 338 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 ADCY1Q08828 1119 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 ANKS3Q6ZW76 656 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 DIS3L2Q8IYB7 885 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 ZNF461Q8TAF7 563 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 DEPTORQ8TB45 409 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 ELSPBP1Q96BH3 223 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 POLR3CQ9BUI4 534 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 BRMS1Q9HCU9 246 aa18.09■□□□□ 0.49
SHKBP1-215ENST00000597649 SMIM28A0A1B0GU29 152 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 WDR27A2RRH5 827 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 PTPN2P17706 415 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 ROR1Q01973 937 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 GRM2Q14416 872 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 ECM1Q16610 540 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 DCAF4L1Q3SXM0 396 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 FAM78AQ5JUQ0 283 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 SLC8B1Q6J4K2 584 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 ALKAL1Q6UXT8 129 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 GPR161Q8N6U8 529 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 CEP120Q8N960 986 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 NSUN7Q8NE18 718 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 ZSWIM3Q96MP5 696 aa18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 LLPHQ9BRT6 129 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 MAP1BP46821 2468 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-215ENST00000597649 CHD6Q8TD26 2715 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 DCDC2BA2VCK2 349 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 NCAM2O15394 837 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 JAK2O60674 1132 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 MCM7P33993 719 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 XKR4Q5GH76 650 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 ATF7IP2Q5U623 682 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 UROC1Q96N76 676 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 ZMAT2Q96NC0 199 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 CORO1BQ9BR76 489 aa18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 NDRG2Q9UN36 371 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 MRPS17Q9Y2R5 130 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-215ENST00000597649 ARHGEF35A5YM69 484 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 PRR5-ARHGAP8B1AHC4 643 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 TRAPPC3O43617 180 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 MOSPD3O75425 235 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 RPA1P27694 616 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 ARPP19P56211 112 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 HMGN5P82970 282 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 ARHGAP8P85298 464 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 MRPL58Q14197 206 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 BECN1Q14457 450 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 MAP4K3Q8IVH8 894 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 HS6ST3Q8IZP7 471 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 FAM184AQ8NB25 1140 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 DNASE1L2Q92874 299 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 ZFP14Q9HCL3 533 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 TRIP11Q15643 1979 aa18.06■□□□□ 0.48
SHKBP1-215ENST00000597649 MEFVO15553 781 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 LRG1P02750 347 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 ATF2P15336 505 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 SDHBP21912 280 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 ELF1P32519 619 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 ST3GAL1Q11201 340 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 LPAL2Q16609 132 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 MAMSTRQ6ZN01 415 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 TCEAL8Q8IYN2 117 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 SECISBP2LQ93073 1101 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 ASB16Q96NS5 453 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 TRMT61BQ9BVS5 477 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 FAM126AQ9BYI3 521 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 CHRDQ9H2X0 955 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 BRD9Q9H8M2 597 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 LMAN1LQ9HAT1 526 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 CYP4F11Q9HBI6 524 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 ZNF334Q9HCZ1 680 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 PTPRHQ9HD43 1115 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 USP18Q9UMW8 372 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 TNFSF13BQ9Y275 285 aa18.05■□□□□ 0.48
SHKBP1-215ENST00000597649 NCANO14594 1321 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 PODXLO00592 558 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 MAN2B1O00754 1011 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 PRRG1O14668 218 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 MICAL2O94851 1124 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 VIPR2P41587 438 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 GRM5P41594 1212 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 EFNA5P52803 228 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 OSTNP61366 133 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 LMNB2Q03252 620 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 GAS6Q14393 721 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 PPP2R5AQ15172 486 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 ZNF174Q15697 407 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 VITQ6UXI7 678 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 C18orf25Q96B23 403 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms